Changelog for
bedtools-doc-2.27.1-3.1.x86_64.rpm :
Mon Oct 1 14:00:00 2018 Bernhard Wiedemann
- Drop environment.pickle to make package build reproducible
Thu Jul 12 14:00:00 2018 flyosAATTmailoo.org
- Cleaned spec file using spec-cleaner
- Update to 2.27.1
* Fixed a big memory leak and algorithmic flaw in the split option. Thanks to Neil Kindlon!
* Resolved compilation errors on OSX High Sierra. Many thanks to AATTjonchang!
* Fixed a bug in the shift tool that caused some intervals to exceed the end of the chromosome. Thanks to AATTwlholtz
* Fixed major bug in groupby that prevented proper functionality.
* Speed improvements to the shuffle tool.
* Bug fixes to the p-value calculation in the fisher tool. Thanks to Brent Pedersen.
* Allow BED headers to start with chrom or chr
* Fixes to the \"k-closest\" functionality in the closest tool. Thanks to Neil Kindlon.
* Fixes to the output of the freqasc, freqdesc, distinct_sort_num and distinct_sort, and num_desc operations in the groupby tool. Thanks to AATTghuls.
* Many minor bug fixes and compilation improvements from Luke Goodsell.
* Added the -fullHeader option to the maskfasta tool. Thanks to AATTghuls.
* Many bug fixes and performance improvements from John Marshall.
* Fixed bug in the -N/-f behavior in subtract.
* Full support for .fai files as genome (-g) files.
* Many other minor bug fixes and functionality improvements.
Fri Jan 20 13:00:00 2017 badshah400AATTgmail.com
- Clean up spec file:
* Split out docs into a doc subpackage.
* Remove unnecessary .buildinfo file from the rpm file list.
* Remove exec bits from a file which is not supposed to be
executable (not in an exec directory, and does not have
a hashbang).
* Remove EOL period from summary for %{name}-data package.
- Add rpmlintrc file to suppress warnings about missing man pages,
this is not something we can fix without upstream support.
Fri Jan 20 13:00:00 2017 flyosAATTmailoo.org
- Initial build