Changelog for python310-pymol-3.0.0-1.1.x86_64.rpm :

* Tue Jun 18 2024 - update to 3.0.0
* Panels - Nucleic Acid Builder supported - Scenes Panel (Basic version) - Improved APBS electrostatics plugin integrated
* Distance/Bonding detection - Halogen-bond detection and display
* Python API - \"fnab\" command (sequence to nucleic acid chain) - Improved CGO builder API - get_sasa_relative() \"subsele\" argument added - new clip modes/API - iterate() adds \"explicit_valence\" and \"explicit_degree\" - \"cell_centered\" setting added - by grid-cell background gradient \"bg_gradient=2\" - look_at() added - experimental \"curve_new\" / \"move_on_curve\"
* Developer - C++17 required - pymol-testing integrated - pytest introduced - Github Actions CI
* And many other fixes and small additions provided by developers and the community...- spec file:
* re-add test related stuff as upstream introduced a pytest based testing
* drop TestExporting.testglTF - requires an executable from Schrodinger
* on Leap, drop / tweak some tests to fit old package versions
* Fri Aug 11 2023 - update to 2.5.0
* File Import/Export - DX binary map import (
*dxbin) - PDB/MMTF export: symmetry information now added - Improved FASTA import - Support for map.gz and mrc.gz extensions
* Builder & Panels - Improved Fuse command (disallows hypervalent bonds, substitute monovalent atoms instead of attaching to them) - Customizable keyboard shortcut menu - Properties inspector now supports unsetting settings with “Delete” key
* Graphics & Visualization - Ray interior colors now match primitives with `set ray_interior_color, atomic` - Isomesh transparency support - `sphere_mode` 5 removed (9 as replacement) - Curved cartoon cylindrical helices - Isosurface generation via marching cubes with setting `isosurface_algorithm, (0, 1)` (0 requires VTKm)
* PBC Handling - Periodic boundary conditions supported in rebond, smooth, and intra_fit
* Python API - Python 2 support removed - pbc argument added to rebond, smooth, and intra_fit - png(None) returns bytes - scene_order() allows list for `names` - pbc_wrap() and pbc_unwrap added - matrix_reset() supports `state=0` for all states - editing_ring() added - unset now restores the default value for global settings - load_traj now uses state=1 by default - get_area command and dots representation: Exclude “flag ignore” atoms- no-o3.patch: adapt to 2.5.0- spec file:
* some tweaks to adapt to 2.5.0
* remove test related stuff; test run commands are removed from 2.5.0 as unmaintained and useless
* Wed May 19 2021 Steve Kowalik - Remove the execute bit from some test scripts to remove a spurious requirement.
* Sun Feb 21 2021 andy great - Skip python3.6 because numpy no longer support it.- Add mmtf-cpp-devel and use msgpackc.- Attempt to get the test to run.
* Use _service to download pymol-testing for test data.
* Use bcond to enable/disable testing arguments.
* Pymol seems to need itself to test.
* Add %check section.
* Tue Sep 01 2020 Matej Cepl - Update to 2.4.0:
* load_traj - support netcdf format - support `selection` argument with all file formats
* CCP4/MRC Map Support - Distinguish .ccp4 and .mrc extensions (regarding origin) - .map extension: auto-detect the format
* New distance mode 8
* MMTF export: Consider `pdb_retain_ids` setting
* GLTF export (based on collada2gltf)
* New `internal_gui_name_color_mode` setting
* MPEG4 Movie export: Apply `movie_fps` setting to exported file
* Python API - Improved error handling with exceptions - New: cmd.rebond() - New: cmd.get_capabilities() - Fix: cmd.get_bonds() state off by one - cmd.fit() et al.: raise on error
* Launch Options - Restore `-V` launch argument for external GUI height - macOS: `open` event opens new window
* Sat Feb 01 2020 Stefan Brüns - Remove glew runtime dependency (only contains debug tools and documentation).- Remove freeglut build dependency (unused unless enabled with \'--glut\' setup.py option).- Use https for URL.
* Mon Feb 11 2019 Matej Cepl - Upgrade to 2.3.0:
* atom-level cartoon_transparency
* aln export for Nucleic Acids
* new API function: cmd.set_raw_alignment()
* fetch async=0 by default
* fast MMTF export (requires mmtf-cpp)
* new setting: seq_view_gap_mode
* Thu Jan 03 2019 opensuse-packagingAATTopensuse.org- Update to version 2.2.0+git.1544795767.c481a7c1:
* fix SettingUniqueFromPyList w/ float3
* remove pymol::Image::Image(T&& vec, ...)
* refactor: pymol::Image tweaks
* rewrite \"get_raw_alignment\"
* refactor: pymol::vla::operator->() usage
* fix #16 pymol::vla::operator[] for VS2015 32bit
* fix pymol::vla::operator+ for VS2015
* pymol::Image::pixels()
* fix build
* fix macOS build- Switch off msgpackc as we don\'t have mmtf-cpp packaged.
* Thu Aug 23 2018 tchvatalAATTsuse.com- Version update to 2.2.0:
* Switch devel links to github
* No finegraned news file see ChangeLog for commit info- Rebase patch no-o3.patch
* Thu Aug 23 2018 tchvatalAATTsuse.com- Fix fdupes call- Install license and docu files