Changelog for python3-YODA-1.9.7-53.2.x86_64.rpm :

* Sun Oct 23 2022 badshah400AATTgmail.com- Update to version 1.9.7
* Add Stat and Uncor to labels flagged as uncorrelated.
* Update yaml-cpp version for C++17 compatibility.
* Replace distutils with sysconfig and manual calls to the compiler.- Add YODA-correct-python-platlib.patch: Use correct python platlib ($prefix/lib64) consistently across different python versions; although we do not build for multiple python versions, we would not want to adapt the file list everytime upstream python vacillates between lib (e.g. python 3.8/3.10) vs lib64 (e.g. python 3.9) for platlib.
* Wed Aug 24 2022 badshah400AATTgmail.com- Set PYTHONPATH to buildroot\'s python3_sitearch before testing to allow importing of yoda module.
* Fri Jul 15 2022 badshah400AATTgmail.com- Update to version 1.9.6:
* Pass ignoreOffDiagonalTerms correctly when retrieving covariance matrix from a Scatter2D.
* Add a covariance/off-diag test to test-s2d.py
* Force Cython rebuilds on all .pyx files, if possible (helps with Python ABI compat).- Drop 0001-fix-cython-rebuild-after-configure.patch: incorporated upstream.
* Thu Jul 07 2022 christopheAATTkrop.fr- Add patch to fix build with python 3.10:
* 0001-fix-cython-rebuild-after-configure.patch- Spec cleanup
* Sun May 29 2022 badshah400AATTgmail.com- Update to version 1.9.5:
* Add per-AO double-precision writing if the WriterDoublePrecision annotation is set.
* Ensure that default variation +- errors are both positive, for all Scatter types. Original patch by Jon Butterworth.
* Protect against NaNs arising from the YAML parser in error-breakdown calcs.
* Tue Dec 07 2021 badshah400AATTgmail.com- Update to version 1.9.4:
* Fix Scatter.variations keys to be string instead of bytes in Python 3.- Changes from version 1.9.3:
* yoda2root,root2yoda: use ROOT in the batch mode.
* Restructure tests to use autotools standard naming and trigger on extensions, and to ensure testwriter runs before testreader.
* Fix Point.errMap() keys to be string instead of bytes in Python 3.
* Catch low-stats errors in computing errors in H1 and H2 conversion to scatters.
* Sat Nov 13 2021 badshah400AATTgmail.com- Update to version 1.9.2:
* Fix ao.path setting to use ao.setPath() in root2yoda.
* Introduce rmVariations() for Points and Scatters
* Add precision arguments to unbound write functions, and Python mapping of setPrecision() and useCompression() methods of Writer classes.
* Fix IO failure modes to actually report exceptions, and with correct types and error messages.
* Fix broken reading gzipped files in Python (was a regression in 1.9.0)
* Provide more options to specify the Cython command to be used.
* Fix yAvgErr -> yErrAvg typo in Scatter2D.yErrAvgs.
* yodascale: improved handling of .yoda.gz extensions, and adding --output.
* Fix a bug with reading files while running with non-US locales.
* Remove rogue s.variations() call, causing rivet-merge to crash
* Change the Axis2D edge-uniqueness test to be based on the smallest bin width rather than the median.
* Remove adoptPoint, make addPoint(Point) argument non-const since one should always want to update the parent of the point.
* Add updateTotalUncertainty method which allows the user to automatically set the total error to the sum in quad of the error components for each point.
* Add adoptPoint(s) methods to the Scatter
*D classes, which allows to add a previously-instantiated point while modifying its parentage so that it points back to that Scatter.
* Modify the Scatter
*D copy constructor so that the parentage of the relevant points is correctly set, to avoid set faults after a Scatter
*D is clone()\'d.
* Add some missing functionality which used to only be available to Scatter2D to also cover Scatter{1,3}D.
* Add many additional tests to cover the ErrorBreakdown functionality in existing pytest scripts
* Bin2D: use fuzzyEquals for bin edge comparisons. Required for correct rivet-merge behaviour with 2D histograms.
* Provide x,yWidths() functions on Histos and Profiles.
* Thu Apr 01 2021 badshah400AATTgmail.com- Update to version 1.9.0:
* Add missing inline declarations to free IO functions.
* Add fillDim() methods to the Bin, Bin1D and Bin2D classes.
* Rename the Point getParentAO etc. to getParent, using the new Scatter base, and improve the accessor methods.
* Add Scatter base class to the Scatter classes, with rmPoints() implemented there.
* Add Binned and Fillable base classes, the former introducing the fillDim() method and rmBin(), and use them as ABCs for the counter, histo and profile types.
* Allow YODA\'s Python interface to read from StringIO and FileIO objects.
* Add rmPoint() and rmPoints() methods on all Scatter types.
* Change scaleDim() to scale() for points and scatters
* Remove ROOT5 compatibility, and handle 6.22 change in PyROOT.
* Fix out-of-source builds re. bash completions.
* Fixes to the Profile1D Python interface.
* Add header include to AnalysisObject.h to support GCC11 (cf. http://gcc.gnu.org/gcc-11/porting_to.html)
* Restructure yodamerge to use pairwise merges, avoiding simultaneous loading of all the input files and greatly speeding up processing. Simultaneous simplification by replacement of yodamerge stacking functionality with yodastack.
* Sat Nov 28 2020 badshah400AATTgmail.com- Update to version 1.8.5:
* Add relErrs() functions to the H1D and H2D Python interfaces.
* Add an explicit configure test and override variable for the cython executable.
* Fix typo from xAvgErr -> xErrAvg in Scatter2D.xErrAvgs() Python function.
* Mon Nov 09 2020 badshah400AATTgmail.com- Update to version 1.8.4:
* Don\'t suppress cross-section-normalised empty histograms in yodamerge.
* Use ROOT\'s ROOT_VERSION_CODE and ROOT_VERSION macros to handle the changing TPython API.
* Do not apply bin-width scaling by default between YODA and ROOT binned objects.
* Improve ROOT conversion utilities to support a fuller set of width-scaling and focus-mapping options.
* Fix Point1D.setXErrs() function to handle sources and asymm errors correctly.
* Map scatter reset() functions into Python.
* Create bash completion dir in $prefix/etc if it doesn\'t exist.
* Fix missing call-parentheses in Python-mapped Bin classes, including in the __repr__ functions, which was making print(bin) crash.- Move bash_completion file from /usr/etc, where it is installed, to the correct dir: `%{_datadir}/bash-completions/completions/`; add BuildRequires: bash-completion for correct dir ownership.
* Tue Jul 14 2020 badshah400AATTgmail.com- Update to version 1.8.3:
* The python method `Histo2D.addBins` was reimplemented using `Histo2D::addBins()` C++ method instead of `Histo2D::addBin()` for better performance.
* Make the low stats error for variances strictly require Neff > 1, rather than a fuzzy comparison that can cause trouble downstream.
* Make xyMids,Foci,Errs,Mins,Maxs etc. runtime configurable with \'unique\' and \'asgrid\' optional params.
* Convert geometric axis-property array functions on Histo2D and Profile2D to return the unique edges, mins, maxes, mids, etc. rather than the heavily repeated versions for all the bins.
* Fix Histo2D.volumes() Python mapping, and add sumWs() functions to all histo types.
* Add asgrid optional arguments to value-related Python methods for Histo2D and Profile2D
* Add computation of Python versions and passing them to Cython as command-line flags.- Changes from version 1.8.2:
* Fix off-by-one error in Axis2D.numBinsX/Y() return values, fixing Histo2D and Profile2D.
* Add numBinsX() methods to the 1D histogram and profile classes.
* Py3 compatibility fix
* Fix call to `Histo1D.annotationsDict`- Changes from version 1.8.1:
* Fix list-return read YODA-format function.
* Removed unwanted space at end of headers.
* Set correct dimension when calling setErrs.
* Added zerrs to 3DScatter headers.
* Added xErrs, yErrs, zErrs to Scatter3D.pyx
* Add underflow and overflow reporting to the verbose yodals printout.
* Re-instate title() and fix bug in z-error storage for scatter 3Ds.
* Python3 compatibility tweaks
* Add a pdfspace() function in C++ and a Python equivalent -- recoded rather than mapped, due to the technical implications of passing Python callables as std::functions -- for custom binning from a density function.
* Fix YODA 1.7 style call to AO.dim.
* Update yodamerge ao_out.point(i).setVal(dim, val_i)
* IO.pyx: missing python3 compatibility
* Sort dicts on IO write(), and return ordered dicts in read mode if possible.- Drop YODA-py3-compatibility-for-IO_pyx.patch: incorporated upstream.
* Sat Jan 18 2020 badshah400AATTgmail.com- Add YODA-py3-compatibility-for-IO_pyx.patch -- Py3 compatibilty for IO.pyx; patch taken from upstream commit and modified to fix further similar errors (https://gitlab.com/hepcedar/yoda/issues/4).- Change hashbangs referring to python or `env python` to use `/usr/bin/python3` consistently in source dir, rather than from buildroot after installation. This allows to run the tests correctly in the %check section.- Move binaries using the python module to python3-%{name} package.- Run make check.
* Wed Jan 08 2020 badshah400AATTgmail.com- Switch to python3:
* Requires and BuildRequires switched to python3 versions
* Rename python package to python3-%{name} and provide python-%{name} from it; this makes the py3 switch clear to users.
* Explicitly pass PYTHON_VERSION as py3 version to make it build against python3
* Drop an unecessary hashbang from a file in non-exec location.- Remove an sed hack for buildroot in
*.pyc file(s); no longer needed.
* Sat Jan 04 2020 badshah400AATTgmail.com- Update to version 1.8.0:
* Add extra optional bool arguments to the mkScatter converter functions for Histo1D and Histo2D types.
* Force rebuild of the Python interface if a sufficient Cython is found, even if the generated .cpp file is present at configure-time.
* Final conversion to use ast module not just in autotype but as first choice in AO.annotation.
* Remove ALL uses of AATTproperty in the Python interfaces: all methods must have call-parentheses now.
* Improve Python annotation parsing to preferentially use ast rather than yaml.
* Add x/yErrs and x/yErrAvgs functions to Scatter2D Python.- Rebase so numbering patch for updated version.
* Wed Aug 21 2019 badshah400AATTgmail.com- Update to version 1.7.7:
* Fix printing of YAML annotations.
* Fix Python 3 / Unicode compatibility for Point.pyx.- Changes from version 1.7.6:
* Add xEdges and yEdges methods to the 2D Histo and Profile classes, in C++ and Python.
* Remove AATTproperty attributes from Python xEdges methods.
* Fix Python3/argparse attribute access bug in yodamerge.- Changes from version 1.7.5:
* Convert bin/
* scripts to use Python3-compatible argparse rather than old optparse.
* Fix Histo1D::integralRange to include the second-argument bin content as described in the docstring.
* Fix Python3 StringIO import compatibility
* Add -m/-M filtering to yodadiff.
* Fix HistoBin2D printing in Python interface.
* Protect yodamerge against zero-valued (?!) ScaledBy attributes.- Drop conditional for boost BuildRequires pertaining to outdated versions of openSUSE.
* Wed May 01 2019 badshah400AATTgmail.com- Update to version 1.7.4:
* Roll out sameBinning methods for Profile1D and Profile2D.
* Add sameBinning methods for Histo1D and Histo2D.
* Remove debug couts from single-AO Writer::write() function.
* Add --ignore-missing and --ignore-new flags to yodadiff.
* Tidy up point-comparison output of yodadiff.
* Fix additional weighting in yodamerge- See %{_docdir}/YODA-devel/ChangeLog for changes between version 1.7.1 through 1.7.3.- Rebase sover.diff to apply cleanly.
* Wed May 23 2018 badshah400AATTgmail.com- Update to version 1.7.0:
* Add Nentries printout to yodals -v
* Patches for ROOT conversion from Robert Hatcher -- thanks!
* Add YODA format version annotation, at version 2, and update YODA reader to use version info and multiline YAML EOF marker.
* Write YODA annotations in YAML with a --- YAML break-line.
* Enable compressed writing from Python.
* Remove UNUSED macro in favour of anonymous args.
* Enable zipped writing... but only works from C++ so far.
* Add HistoBin2D::area(), and provide a default normto=1.0 argument on the Python Histo2D.normalize() method.
* Change license explicitly to GPLv3, cf. MCnet3 agreement.
* Parse YODA format AO headers as YAML (restriction to single-line dict entries for now).
* Use a slightly enhanced fast numeric parser in ReaderYODA (taken from LHAPDF, originally inspired by Gavin Salam).
* Add an UNSCALE spec option to yodascale, to undo ScaledBy effects.
* Add optional zlib support via zstr
* Fix setVal(i, x) numbered-axis methods on Point2D and Point3D: switch break statements were missing.
* Explicitly load all ROOT objects as a list rather than generator. Patch from Dmitry Kalinkin.
* Improvements to yodaplot, including two operating modes: the default CMP mode is suitable for plotting histos by path, from raw .yoda files.
* Update yoda.plotting functions to treat plot-keys as args and AO annotations via case-insensitive keys.
* Add annotationsDict to the Python AO interface.
* Add AO as an alias for AnalysisObject.
* Add parallel/compatibility yoda1 package to aid eventual transition to YODA v2.
* Add x,y,zMins and Maxs to all 1D data types and scatters (and x,yMin/Max to the scatters) -- Python interface only.
* Rework some of the yoda.plotting tools, making it a bit more compatible with user-scripted matplotlib.
* Add convenience aliases H1D, H2D, P1D, P2D, and S1D, S2D, S3D for the HistoXD, ProfileXD, and ScatterXD classes respectively.
* Add xyVals/Errs and other \'bin array property\' accessors to the Python Histo1D and Profile1D types: important for connection to matplotlib.
* Use Python natsort library to sort yodals output if available.- Rebase sover.diff.- Add BuildRequires: pkgconfig(zlib); now required for bulding YODA.- Fix env-based hashbangs.
* Wed Aug 02 2017 badshah400AATTgmail.com- Update to version 1.6.7:
* pyext/yoda/rootcompat.pyx: Fix ordering of TH1 vs. TProfile conversion
* Add static Reader methods to match the Writer ones.
* Fix Histo2D and Profile2D total distribution reading from YODA format.
* Convert TH1F to TH1D in root2flat. Much simpler than duplicating the TH1D stuff in pyext.- Changes from version 1.6.6:
* Bugfixes in Cython bins accessors for Histo2D.
* Fixed warning messages about the obsoleteness of AIDA so that the scripts actually still work.
* Mon Feb 13 2017 jengelhAATTinai.de- Call ldconfig directly. Add sover.diff, enforce versioning as per guidelines.
* Thu Feb 02 2017 adam.majerAATTsuse.de- use individual libboost-
*-devel packages instead of boost-devel
* Thu Nov 10 2016 badshah400AATTgmail.com- Update to version 1.6.5:
* Fix handling of --enable/disable-root configure options.
* Improvements to Cython version testing.- Numerous changes from last packaged version (1.3.1) through version 1.6.4. Please see ChangeLog file for details.- Drop YODA-boost-configure-for-GCC5.patch: no longer needed due to fixes in upstream code.
* Thu Jun 25 2015 badshah400AATTgmail.com- Add YODA-boost-configure-for-GCC5.patch to fix autoconf boost macros lookup with GCC5; patch taken from boost.m4 upstream [https://github.com/tsuna/boost.m4].- Clean up some further remnants of %buildroot in python byte-compiled files.
* Thu Jun 25 2015 badshah400AATTgmail.com- Update to version 1.3.1: + Adding usefocus optional argument to some mkScatter functions, plus the Python bindings. + Cleaning up some Python mappings of 2D histogram bin classes. + Removing mappings of bin-level fill and scale operations in Python. + Fix formatting and error handling in Python Bin and Dbn __repr__ methods. + Add a -i/--in-place option pair on yodascale. + Convert script matching options to use re search rather than match. + Adding matching options and verbose option to yodals. + Improvements and additions to ROOTCnv.h routines, particularly to TProfile creation: thanks to Roman Lysak for advice. + Add convenience YODA/YODA.h header. + yodascale now uses PointMatcher and can normalize or multiply to abs values or ref histos/bin ranges. + Adding yoda.matcher Python sub-package with PointMatcher functionality. To be used in Professor 2.0 and in yodascale. + Adding \'scat2\' type to yodahist. + Add match/unmatch args to all conversion scripts, via a new Python yoda.script_helpers function. + Script updates, improved docstrings, and improved tab completion. + Add a yoda.plotting sub-module, based on matplotlib. + Small build improvements. + Handle overflow filling in binned types without invoking an exception. + Change inRange to have non-fuzzy comparison behaviour. + Improving/adding __div__ functions in Python for all binned types. + Add std:: prefix to isinf() calls in BinSearcher.h.
* Sun Oct 26 2014 badshah400AATTgmail.com- Update to version 1.3.0: + Use numEntries() rather than effNumEntries() when checking consistency of inputs to efficiency() calculations -- the effNumEntries of a set can be smaller than that of a strict subset, surprisingly! + Small improvements to yodahist and yodaplot behaviours/UIs. + Adding setX/Y/Z(val, err) methods to Point3D. + Add an efficiency method for 2D histos. + Hide fill and fillBin methods from Python mappings of bin types.