Content of RPM biopython-tools-1.58-1-mdv2012.0.i586.rpm :
/usr/share/biopython-1.58/Scripts
/usr/share/biopython-1.58/Scripts/GenBank
/usr/share/biopython-1.58/Scripts/GenBank/check_output.py
/usr/share/biopython-1.58/Scripts/GenBank/check_output_simple.py
/usr/share/biopython-1.58/Scripts/GenBank/find_parser_problems.py
/usr/share/biopython-1.58/Scripts/Performance
/usr/share/biopython-1.58/Scripts/Performance/biosql_performance_load.py
/usr/share/biopython-1.58/Scripts/Performance/biosql_performance_read.py
/usr/share/biopython-1.58/Scripts/Restriction
/usr/share/biopython-1.58/Scripts/Restriction/ranacompiler.py
/usr/share/biopython-1.58/Scripts/Restriction/rebase_update.py
/usr/share/biopython-1.58/Scripts/SeqGui
/usr/share/biopython-1.58/Scripts/SeqGui/SeqGui.py
/usr/share/biopython-1.58/Scripts/Structure
/usr/share/biopython-1.58/Scripts/Structure/hsexpo
/usr/share/biopython-1.58/Scripts/debug
/usr/share/biopython-1.58/Scripts/debug/debug_blast_parser.py
/usr/share/biopython-1.58/Scripts/query_pubmed.py
/usr/share/biopython-1.58/Scripts/scop_pdb.py
/usr/share/biopython-1.58/Scripts/xbbtools
/usr/share/biopython-1.58/Scripts/xbbtools/README
/usr/share/biopython-1.58/Scripts/xbbtools/nextorf.py
/usr/share/biopython-1.58/Scripts/xbbtools/test.fas
/usr/share/biopython-1.58/Scripts/xbbtools/testrp.fas
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_blast.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_blastbg.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_help.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_search.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_sequence.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_translations.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_utils.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbb_widget.py
/usr/share/biopython-1.58/Scripts/xbbtools/xbbtools.py
/usr/share/biopython-1.58/Tests
/usr/share/biopython-1.58/Tests/Abi
/usr/share/biopython-1.58/Tests/Abi/310.ab1
/usr/share/biopython-1.58/Tests/Abi/3100.ab1
/usr/share/biopython-1.58/Tests/Abi/3730.ab1
/usr/share/biopython-1.58/Tests/Abi/empty.ab1
/usr/share/biopython-1.58/Tests/Abi/fake.ab1
/usr/share/biopython-1.58/Tests/Abi/test_data
/usr/share/biopython-1.58/Tests/Ace
/usr/share/biopython-1.58/Tests/Ace/consed_sample.ace
/usr/share/biopython-1.58/Tests/Ace/contig1.ace
/usr/share/biopython-1.58/Tests/Ace/seq.cap.ace
/usr/share/biopython-1.58/Tests/BioSQL
/usr/share/biopython-1.58/Tests/BioSQL/biosqldb-mysql.sql
/usr/share/biopython-1.58/Tests/BioSQL/biosqldb-pg.sql
/usr/share/biopython-1.58/Tests/BioSQL/biosqldb-sqlite.sql
/usr/share/biopython-1.58/Tests/BioSQL/temp_sqlite.db
/usr/share/biopython-1.58/Tests/Blast
/usr/share/biopython-1.58/Tests/Blast/README.txt
/usr/share/biopython-1.58/Tests/Blast/bt001.txt
/usr/share/biopython-1.58/Tests/Blast/bt002.txt
/usr/share/biopython-1.58/Tests/Blast/bt003.txt
/usr/share/biopython-1.58/Tests/Blast/bt004.txt
/usr/share/biopython-1.58/Tests/Blast/bt005.txt
/usr/share/biopython-1.58/Tests/Blast/bt006.txt
/usr/share/biopython-1.58/Tests/Blast/bt007.txt
/usr/share/biopython-1.58/Tests/Blast/bt009.txt
/usr/share/biopython-1.58/Tests/Blast/bt010.txt
/usr/share/biopython-1.58/Tests/Blast/bt011.txt
/usr/share/biopython-1.58/Tests/Blast/bt012.txt
/usr/share/biopython-1.58/Tests/Blast/bt013.txt
/usr/share/biopython-1.58/Tests/Blast/bt014.txt
/usr/share/biopython-1.58/Tests/Blast/bt015.txt
/usr/share/biopython-1.58/Tests/Blast/bt016.txt
/usr/share/biopython-1.58/Tests/Blast/bt017.txt
/usr/share/biopython-1.58/Tests/Blast/bt018.txt
/usr/share/biopython-1.58/Tests/Blast/bt019.txt
/usr/share/biopython-1.58/Tests/Blast/bt020.txt
/usr/share/biopython-1.58/Tests/Blast/bt021.txt
/usr/share/biopython-1.58/Tests/Blast/bt022.txt
/usr/share/biopython-1.58/Tests/Blast/bt023.txt
/usr/share/biopython-1.58/Tests/Blast/bt024.txt
/usr/share/biopython-1.58/Tests/Blast/bt025.txt
/usr/share/biopython-1.58/Tests/Blast/bt026.txt
/usr/share/biopython-1.58/Tests/Blast/bt027.txt
/usr/share/biopython-1.58/Tests/Blast/bt028.txt
/usr/share/biopython-1.58/Tests/Blast/bt029.txt
/usr/share/biopython-1.58/Tests/Blast/bt030.txt
/usr/share/biopython-1.58/Tests/Blast/bt031.txt
/usr/share/biopython-1.58/Tests/Blast/bt032.txt
/usr/share/biopython-1.58/Tests/Blast/bt033.txt
/usr/share/biopython-1.58/Tests/Blast/bt034.txt
/usr/share/biopython-1.58/Tests/Blast/bt035.txt
/usr/share/biopython-1.58/Tests/Blast/bt036.txt
/usr/share/biopython-1.58/Tests/Blast/bt037.txt
/usr/share/biopython-1.58/Tests/Blast/bt038.txt
/usr/share/biopython-1.58/Tests/Blast/bt039.txt
/usr/share/biopython-1.58/Tests/Blast/bt040.txt
/usr/share/biopython-1.58/Tests/Blast/bt041.txt
/usr/share/biopython-1.58/Tests/Blast/bt042.txt
/usr/share/biopython-1.58/Tests/Blast/bt043.txt
/usr/share/biopython-1.58/Tests/Blast/bt044.txt
/usr/share/biopython-1.58/Tests/Blast/bt045.txt
/usr/share/biopython-1.58/Tests/Blast/bt046.txt
/usr/share/biopython-1.58/Tests/Blast/bt047.txt
/usr/share/biopython-1.58/Tests/Blast/bt048.txt
/usr/share/biopython-1.58/Tests/Blast/bt049.txt
/usr/share/biopython-1.58/Tests/Blast/bt050.txt
/usr/share/biopython-1.58/Tests/Blast/bt051.txt
/usr/share/biopython-1.58/Tests/Blast/bt052.txt
/usr/share/biopython-1.58/Tests/Blast/bt053.txt
/usr/share/biopython-1.58/Tests/Blast/bt054.txt
/usr/share/biopython-1.58/Tests/Blast/bt055.txt
/usr/share/biopython-1.58/Tests/Blast/bt056.txt
/usr/share/biopython-1.58/Tests/Blast/bt057.txt
/usr/share/biopython-1.58/Tests/Blast/bt058.txt
/usr/share/biopython-1.58/Tests/Blast/bt059.txt
/usr/share/biopython-1.58/Tests/Blast/bt060.txt
/usr/share/biopython-1.58/Tests/Blast/bt061.txt
/usr/share/biopython-1.58/Tests/Blast/bt062.txt
/usr/share/biopython-1.58/Tests/Blast/bt063.txt
/usr/share/biopython-1.58/Tests/Blast/bt064.txt
/usr/share/biopython-1.58/Tests/Blast/bt065.txt
/usr/share/biopython-1.58/Tests/Blast/bt066.txt
/usr/share/biopython-1.58/Tests/Blast/bt067.txt
/usr/share/biopython-1.58/Tests/Blast/bt068.txt
/usr/share/biopython-1.58/Tests/Blast/bt069.txt
/usr/share/biopython-1.58/Tests/Blast/bt070.txt
/usr/share/biopython-1.58/Tests/Blast/bt071.txt
/usr/share/biopython-1.58/Tests/Blast/bt072.txt
/usr/share/biopython-1.58/Tests/Blast/bt073.txt
/usr/share/biopython-1.58/Tests/Blast/bt074.txt
/usr/share/biopython-1.58/Tests/Blast/bt075.txt
/usr/share/biopython-1.58/Tests/Blast/bt076.txt
/usr/share/biopython-1.58/Tests/Blast/bt077.txt
/usr/share/biopython-1.58/Tests/Blast/bt078.txt
/usr/share/biopython-1.58/Tests/Blast/bt079.txt
/usr/share/biopython-1.58/Tests/Blast/bt080.txt
/usr/share/biopython-1.58/Tests/Blast/bt081.txt
/usr/share/biopython-1.58/Tests/Blast/xbt001.xml
/usr/share/biopython-1.58/Tests/Blast/xbt002.xml
/usr/share/biopython-1.58/Tests/Blast/xbt003.xml
/usr/share/biopython-1.58/Tests/Blast/xbt004.xml
/usr/share/biopython-1.58/Tests/Blast/xbt005.xml
/usr/share/biopython-1.58/Tests/Blast/xbt006.xml
/usr/share/biopython-1.58/Tests/Blast/xbt007.xml
/usr/share/biopython-1.58/Tests/Blast/xbt008.xml
/usr/share/biopython-1.58/Tests/Blast/xbt009.xml
/usr/share/biopython-1.58/Tests/Blast/xbt010.xml
/usr/share/biopython-1.58/Tests/Blast/xbt011.xml
/usr/share/biopython-1.58/Tests/Clustalw
/usr/share/biopython-1.58/Tests/Clustalw/cw02.aln
/usr/share/biopython-1.58/Tests/Clustalw/hedgehog.aln
/usr/share/biopython-1.58/Tests/Clustalw/odd_consensus.aln
/usr/share/biopython-1.58/Tests/Clustalw/opuntia.aln
/usr/share/biopython-1.58/Tests/Clustalw/promals3d.aln
/usr/share/biopython-1.58/Tests/Clustalw/protein.aln
/usr/share/biopython-1.58/Tests/CodonUsage
/usr/share/biopython-1.58/Tests/CodonUsage/HighlyExpressedGenes.txt
/usr/share/biopython-1.58/Tests/Compass
/usr/share/biopython-1.58/Tests/Compass/comtest1
/usr/share/biopython-1.58/Tests/Compass/comtest2
/usr/share/biopython-1.58/Tests/EMBL
/usr/share/biopython-1.58/Tests/EMBL/A04195.imgt
/usr/share/biopython-1.58/Tests/EMBL/AAA03323.embl
/usr/share/biopython-1.58/Tests/EMBL/AE017046.embl
/usr/share/biopython-1.58/Tests/EMBL/DD231055_edited.embl
/usr/share/biopython-1.58/Tests/EMBL/Human_contigs.embl
/usr/share/biopython-1.58/Tests/EMBL/SC10H5.embl
/usr/share/biopython-1.58/Tests/EMBL/TRBG361.embl
/usr/share/biopython-1.58/Tests/EMBL/U87107.embl
/usr/share/biopython-1.58/Tests/EMBL/epo_prt_selection.embl
/usr/share/biopython-1.58/Tests/Emboss
/usr/share/biopython-1.58/Tests/Emboss/NirK.primer3
/usr/share/biopython-1.58/Tests/Emboss/NirK_full.primer3
/usr/share/biopython-1.58/Tests/Emboss/alignret.txt
/usr/share/biopython-1.58/Tests/Emboss/bac_find.primer3
/usr/share/biopython-1.58/Tests/Emboss/bac_find.psearch
/usr/share/biopython-1.58/Tests/Emboss/cds_forward.primer3
/usr/share/biopython-1.58/Tests/Emboss/cds_reverse.primer3
/usr/share/biopython-1.58/Tests/Emboss/internal_oligo.primer3
/usr/share/biopython-1.58/Tests/Emboss/matcher_pair.txt
/usr/share/biopython-1.58/Tests/Emboss/matcher_simple.txt
/usr/share/biopython-1.58/Tests/Emboss/needle.txt
/usr/share/biopython-1.58/Tests/Emboss/needle_asis.txt
/usr/share/biopython-1.58/Tests/Emboss/short.primer3
/usr/share/biopython-1.58/Tests/Emboss/water.txt
/usr/share/biopython-1.58/Tests/Emboss/water2.txt
/usr/share/biopython-1.58/Tests/Entrez
/usr/share/biopython-1.58/Tests/Entrez/egquery1.xml
/usr/share/biopython-1.58/Tests/Entrez/egquery2.xml
/usr/share/biopython-1.58/Tests/Entrez/einfo1.xml
/usr/share/biopython-1.58/Tests/Entrez/einfo2.xml
/usr/share/biopython-1.58/Tests/Entrez/einfo3.xml
/usr/share/biopython-1.58/Tests/Entrez/einfo4.xml
/usr/share/biopython-1.58/Tests/Entrez/elink1.xml
/usr/share/biopython-1.58/Tests/Entrez/elink2.xml
/usr/share/biopython-1.58/Tests/Entrez/elink3.xml
/usr/share/biopython-1.58/Tests/Entrez/elink4.xml
/usr/share/biopython-1.58/Tests/Entrez/elink5.xml
/usr/share/biopython-1.58/Tests/Entrez/elink6.xml
/usr/share/biopython-1.58/Tests/Entrez/elink7.xml
/usr/share/biopython-1.58/Tests/Entrez/elink8.xml
/usr/share/biopython-1.58/Tests/Entrez/elink9.xml
/usr/share/biopython-1.58/Tests/Entrez/epost1.xml
/usr/share/biopython-1.58/Tests/Entrez/epost2.xml
/usr/share/biopython-1.58/Tests/Entrez/epost3.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch1.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch2.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch3.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch4.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch5.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch6.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch7.xml
/usr/share/biopython-1.58/Tests/Entrez/esearch8.xml
/usr/share/biopython-1.58/Tests/Entrez/espell.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary1.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary2.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary3.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary4.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary5.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary6.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary7.xml
/usr/share/biopython-1.58/Tests/Entrez/esummary8.xml
/usr/share/biopython-1.58/Tests/Entrez/journals.xml
/usr/share/biopython-1.58/Tests/Entrez/ncbi_mim.xml
/usr/share/biopython-1.58/Tests/Entrez/nucleotide1.xml
/usr/share/biopython-1.58/Tests/Entrez/nucleotide2.xml
/usr/share/biopython-1.58/Tests/Entrez/protein.xml
/usr/share/biopython-1.58/Tests/Entrez/pubmed1.xml
/usr/share/biopython-1.58/Tests/Entrez/pubmed2.xml
/usr/share/biopython-1.58/Tests/Entrez/pubmed3.html
/usr/share/biopython-1.58/Tests/Entrez/taxonomy.xml
/usr/share/biopython-1.58/Tests/Enzymes
/usr/share/biopython-1.58/Tests/Enzymes/lactate.txt
/usr/share/biopython-1.58/Tests/Enzymes/lipoprotein.txt
/usr/share/biopython-1.58/Tests/Enzymes/proline.txt
/usr/share/biopython-1.58/Tests/Enzymes/valine.txt
/usr/share/biopython-1.58/Tests/ExtendedPhylip
/usr/share/biopython-1.58/Tests/ExtendedPhylip/primates.phyx
/usr/share/biopython-1.58/Tests/FSSP
/usr/share/biopython-1.58/Tests/FSSP/1cnv.fssp
/usr/share/biopython-1.58/Tests/Fasta
/usr/share/biopython-1.58/Tests/Fasta/README
/usr/share/biopython-1.58/Tests/Fasta/aster.pro
/usr/share/biopython-1.58/Tests/Fasta/centaurea.nu
/usr/share/biopython-1.58/Tests/Fasta/dups.fasta
/usr/share/biopython-1.58/Tests/Fasta/elderberry.nu
/usr/share/biopython-1.58/Tests/Fasta/f001
/usr/share/biopython-1.58/Tests/Fasta/f002
/usr/share/biopython-1.58/Tests/Fasta/f003
/usr/share/biopython-1.58/Tests/Fasta/fa01
/usr/share/biopython-1.58/Tests/Fasta/lavender.nu
/usr/share/biopython-1.58/Tests/Fasta/loveliesbleeding.pro
/usr/share/biopython-1.58/Tests/Fasta/lupine.nu
/usr/share/biopython-1.58/Tests/Fasta/output001.m10
/usr/share/biopython-1.58/Tests/Fasta/output002.m10
/usr/share/biopython-1.58/Tests/Fasta/output003.m10
/usr/share/biopython-1.58/Tests/Fasta/output004.m10
/usr/share/biopython-1.58/Tests/Fasta/output005.m10
/usr/share/biopython-1.58/Tests/Fasta/output006.m10
/usr/share/biopython-1.58/Tests/Fasta/output007.m10
/usr/share/biopython-1.58/Tests/Fasta/output008.m10
/usr/share/biopython-1.58/Tests/Fasta/phlox.nu
/usr/share/biopython-1.58/Tests/Fasta/rose.pro
/usr/share/biopython-1.58/Tests/Fasta/rosemary.pro
/usr/share/biopython-1.58/Tests/Fasta/sweetpea.nu
/usr/share/biopython-1.58/Tests/Fasta/wisteria.nu
/usr/share/biopython-1.58/Tests/GFF
/usr/share/biopython-1.58/Tests/GFF/NC_001422.gbk
/usr/share/biopython-1.58/Tests/GFF/NC_001802.fna
/usr/share/biopython-1.58/Tests/GFF/NC_001802lc.fna
/usr/share/biopython-1.58/Tests/GFF/NC_001802x.fna
/usr/share/biopython-1.58/Tests/GFF/multi.fna
/usr/share/biopython-1.58/Tests/GenBank
/usr/share/biopython-1.58/Tests/GenBank/NC_000932.faa
/usr/share/biopython-1.58/Tests/GenBank/NC_000932.gb
/usr/share/biopython-1.58/Tests/GenBank/NC_005816.faa
/usr/share/biopython-1.58/Tests/GenBank/NC_005816.ffn
/usr/share/biopython-1.58/Tests/GenBank/NC_005816.fna
/usr/share/biopython-1.58/Tests/GenBank/NC_005816.gb
/usr/share/biopython-1.58/Tests/GenBank/NC_005816.tsv
/usr/share/biopython-1.58/Tests/GenBank/NT_019265.gb
/usr/share/biopython-1.58/Tests/GenBank/arab1.gb
/usr/share/biopython-1.58/Tests/GenBank/blank_seq.gb
/usr/share/biopython-1.58/Tests/GenBank/cor6_6.gb
/usr/share/biopython-1.58/Tests/GenBank/dbsource_wrap.gb
/usr/share/biopython-1.58/Tests/GenBank/extra_keywords.gb
/usr/share/biopython-1.58/Tests/GenBank/gbvrl1_start.seq
/usr/share/biopython-1.58/Tests/GenBank/iro.gb
/usr/share/biopython-1.58/Tests/GenBank/noref.gb
/usr/share/biopython-1.58/Tests/GenBank/one_of.gb
/usr/share/biopython-1.58/Tests/GenBank/origin_line.gb
/usr/share/biopython-1.58/Tests/GenBank/pBAD30.gb
/usr/share/biopython-1.58/Tests/GenBank/pri1.gb
/usr/share/biopython-1.58/Tests/GenBank/protein_refseq.gb
/usr/share/biopython-1.58/Tests/GenBank/protein_refseq2.gb
/usr/share/biopython-1.58/Tests/Geo
/usr/share/biopython-1.58/Tests/Geo/GSE16.txt
/usr/share/biopython-1.58/Tests/Geo/GSM645.txt
/usr/share/biopython-1.58/Tests/Geo/GSM691.txt
/usr/share/biopython-1.58/Tests/Geo/GSM700.txt
/usr/share/biopython-1.58/Tests/Geo/GSM804.txt
/usr/share/biopython-1.58/Tests/Geo/soft_ex_affy.txt
/usr/share/biopython-1.58/Tests/Geo/soft_ex_affy_chp.txt
/usr/share/biopython-1.58/Tests/Geo/soft_ex_dual.txt
/usr/share/biopython-1.58/Tests/Geo/soft_ex_family.txt
/usr/share/biopython-1.58/Tests/Geo/soft_ex_platform.txt
/usr/share/biopython-1.58/Tests/Geo/soft_ex_series.txt
/usr/share/biopython-1.58/Tests/Graphics
/usr/share/biopython-1.58/Tests/Graphics/README
/usr/share/biopython-1.58/Tests/IntelliGenetics
/usr/share/biopython-1.58/Tests/IntelliGenetics/TAT_mase_nuc.txt
/usr/share/biopython-1.58/Tests/IntelliGenetics/VIF_mase-pro.txt
/usr/share/biopython-1.58/Tests/IntelliGenetics/vpu_nucaligned.txt
/usr/share/biopython-1.58/Tests/KEGG
/usr/share/biopython-1.58/Tests/KEGG/compound.irregular
/usr/share/biopython-1.58/Tests/KEGG/compound.sample
/usr/share/biopython-1.58/Tests/KEGG/enzyme.irregular
/usr/share/biopython-1.58/Tests/KEGG/enzyme.sample
/usr/share/biopython-1.58/Tests/KEGG/map00950.rea
/usr/share/biopython-1.58/Tests/MEME
/usr/share/biopython-1.58/Tests/MEME/mast.dna.oops.txt
/usr/share/biopython-1.58/Tests/MEME/mast.protein.oops.txt
/usr/share/biopython-1.58/Tests/MEME/mast.protein.tcm.txt
/usr/share/biopython-1.58/Tests/MEME/meme.dna.oops.txt
/usr/share/biopython-1.58/Tests/MEME/meme.protein.oops.txt
/usr/share/biopython-1.58/Tests/MEME/meme.protein.tcm.txt
/usr/share/biopython-1.58/Tests/Medline
/usr/share/biopython-1.58/Tests/Medline/pubmed_result1.txt
/usr/share/biopython-1.58/Tests/Medline/pubmed_result2.txt
/usr/share/biopython-1.58/Tests/MetaTool
/usr/share/biopython-1.58/Tests/MetaTool/Meta3.out
/usr/share/biopython-1.58/Tests/MetaTool/Meta4.out
/usr/share/biopython-1.58/Tests/MetaTool/Meta6.out
/usr/share/biopython-1.58/Tests/MetaTool/Meta7.out
/usr/share/biopython-1.58/Tests/MetaTool/Meta8.out
/usr/share/biopython-1.58/Tests/MetaTool/meta.out
/usr/share/biopython-1.58/Tests/MetaTool/meta2.out
/usr/share/biopython-1.58/Tests/MetaTool/meta9.out
/usr/share/biopython-1.58/Tests/Motif
/usr/share/biopython-1.58/Tests/Motif/Arnt.sites
/usr/share/biopython-1.58/Tests/Motif/SRF.pfm
/usr/share/biopython-1.58/Tests/Motif/alignace.out
/usr/share/biopython-1.58/Tests/Motif/mast.dna.oops.txt
/usr/share/biopython-1.58/Tests/Motif/mast.protein.oops.txt
/usr/share/biopython-1.58/Tests/Motif/mast.protein.tcm.txt
/usr/share/biopython-1.58/Tests/Motif/meme.dna.oops.txt
/usr/share/biopython-1.58/Tests/Motif/meme.out
/usr/share/biopython-1.58/Tests/Motif/meme.protein.oops.txt
/usr/share/biopython-1.58/Tests/Motif/meme.protein.tcm.txt
/usr/share/biopython-1.58/Tests/NBRF
/usr/share/biopython-1.58/Tests/NBRF/B_nuc.pir
/usr/share/biopython-1.58/Tests/NBRF/Cw_prot.pir
/usr/share/biopython-1.58/Tests/NBRF/DMA_nuc.pir
/usr/share/biopython-1.58/Tests/NBRF/DMB_prot.pir
/usr/share/biopython-1.58/Tests/NBRF/clustalw.pir
/usr/share/biopython-1.58/Tests/NeuralNetwork
/usr/share/biopython-1.58/Tests/NeuralNetwork/enolase.fasta
/usr/share/biopython-1.58/Tests/NeuralNetwork/repeat.fasta
/usr/share/biopython-1.58/Tests/Nexus
/usr/share/biopython-1.58/Tests/Nexus/int_node_labels.nwk
/usr/share/biopython-1.58/Tests/Nexus/test_Nexus_input.nex
/usr/share/biopython-1.58/Tests/PAML
/usr/share/biopython-1.58/Tests/PAML/Results
/usr/share/biopython-1.58/Tests/PAML/Results/baseml
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/baseml_SE.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/baseml_alpha1rho1.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m0.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m1.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m2.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m3.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m4.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m5.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m6.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/models/baseml44c_m8.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/nhomo
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/nhomo/baseml_nhomo1.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/nhomo/baseml_nhomo2.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/nhomo/baseml_nhomo3.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/nhomo/baseml_nhomo4.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/npark
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/npark/baseml_npark1.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/npark/baseml_npark2.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/npark/baseml_npark3.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/npark/baseml_npark4.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/versions
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/versions/baseml41.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/versions/baseml43.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/versions/baseml44.out
/usr/share/biopython-1.58/Tests/PAML/Results/baseml/versions/baseml44c.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_NSsites_all.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_SE.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_aa_model0.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_aa_pairwise.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_branchsiteA.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_clademodelC.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_freebranch.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_ngene2_mgene012.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_ngene2_mgene34.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/codeml_pairwise.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/versions
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/versions/codeml41.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/versions/codeml43.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/versions/codeml44.out
/usr/share/biopython-1.58/Tests/PAML/Results/codeml/versions/codeml44c.out
/usr/share/biopython-1.58/Tests/PAML/Results/yn00
/usr/share/biopython-1.58/Tests/PAML/Results/yn00/versions
/usr/share/biopython-1.58/Tests/PAML/Results/yn00/versions/yn0041.out
/usr/share/biopython-1.58/Tests/PAML/Results/yn00/versions/yn0043.out
/usr/share/biopython-1.58/Tests/PAML/Results/yn00/versions/yn0044.out
/usr/share/biopython-1.58/Tests/PAML/Results/yn00/versions/yn0044c.out
/usr/share/biopython-1.58/Tests/PAML/aa_alignment.phylip
/usr/share/biopython-1.58/Tests/PAML/alignment.phylip
/usr/share/biopython-1.58/Tests/PAML/bad.tree
/usr/share/biopython-1.58/Tests/PAML/bad1.ctl
/usr/share/biopython-1.58/Tests/PAML/bad2.ctl
/usr/share/biopython-1.58/Tests/PAML/bad3.ctl
/usr/share/biopython-1.58/Tests/PAML/bad_results.out
/usr/share/biopython-1.58/Tests/PAML/baseml.ctl
/usr/share/biopython-1.58/Tests/PAML/codeml.ctl
/usr/share/biopython-1.58/Tests/PAML/species.tree
/usr/share/biopython-1.58/Tests/PAML/yn00.ctl
/usr/share/biopython-1.58/Tests/PDB
/usr/share/biopython-1.58/Tests/PDB/1A8O.pdb
/usr/share/biopython-1.58/Tests/PDB/1MOT.pdb
/usr/share/biopython-1.58/Tests/PDB/2BEG.pdb
/usr/share/biopython-1.58/Tests/PDB/a_structure.pdb
/usr/share/biopython-1.58/Tests/PDB/ions.pdb
/usr/share/biopython-1.58/Tests/Phd
/usr/share/biopython-1.58/Tests/Phd/phd1
/usr/share/biopython-1.58/Tests/Phd/phd2
/usr/share/biopython-1.58/Tests/Phd/phd_454
/usr/share/biopython-1.58/Tests/Phd/phd_solexa
/usr/share/biopython-1.58/Tests/Phylip
/usr/share/biopython-1.58/Tests/Phylip/hennigian.phy
/usr/share/biopython-1.58/Tests/Phylip/horses.phy
/usr/share/biopython-1.58/Tests/Phylip/horses.tree
/usr/share/biopython-1.58/Tests/Phylip/interlaced.phy
/usr/share/biopython-1.58/Tests/Phylip/interlaced2.phy
/usr/share/biopython-1.58/Tests/Phylip/random.phy
/usr/share/biopython-1.58/Tests/Phylip/reference_dna.phy
/usr/share/biopython-1.58/Tests/Phylip/reference_dna2.phy
/usr/share/biopython-1.58/Tests/PhyloXML
/usr/share/biopython-1.58/Tests/PhyloXML/apaf.xml
/usr/share/biopython-1.58/Tests/PhyloXML/bcl_2.xml
/usr/share/biopython-1.58/Tests/PhyloXML/example.xml
/usr/share/biopython-1.58/Tests/PhyloXML/made_up.xml
/usr/share/biopython-1.58/Tests/PhyloXML/o_tol_332_d_dollo.xml
/usr/share/biopython-1.58/Tests/PhyloXML/phyloxml_examples.xml
/usr/share/biopython-1.58/Tests/PopGen
/usr/share/biopython-1.58/Tests/PopGen/README
/usr/share/biopython-1.58/Tests/PopGen/big.gen
/usr/share/biopython-1.58/Tests/PopGen/big.gen.MIG
/usr/share/biopython-1.58/Tests/PopGen/big.gen.ST2
/usr/share/biopython-1.58/Tests/PopGen/c2line.gen
/usr/share/biopython-1.58/Tests/PopGen/c2space.gen
/usr/share/biopython-1.58/Tests/PopGen/c3line.gen
/usr/share/biopython-1.58/Tests/PopGen/c3space.gen
/usr/share/biopython-1.58/Tests/PopGen/data_dfst_outfile
/usr/share/biopython-1.58/Tests/PopGen/data_fst_outfile
/usr/share/biopython-1.58/Tests/PopGen/dfdist1
/usr/share/biopython-1.58/Tests/PopGen/dout.cpl
/usr/share/biopython-1.58/Tests/PopGen/dout.dat
/usr/share/biopython-1.58/Tests/PopGen/fdist1
/usr/share/biopython-1.58/Tests/PopGen/haplo.gen
/usr/share/biopython-1.58/Tests/PopGen/haplo2.gen
/usr/share/biopython-1.58/Tests/PopGen/haplo3.gen
/usr/share/biopython-1.58/Tests/PopGen/out.cpl
/usr/share/biopython-1.58/Tests/PopGen/out.dat
/usr/share/biopython-1.58/Tests/PopGen/simple.par
/usr/share/biopython-1.58/Tests/Prosite
/usr/share/biopython-1.58/Tests/Prosite/Doc
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00100.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00113.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00144.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00149.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00340.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00424.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00472.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00640.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00787.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/pdoc00933.txt
/usr/share/biopython-1.58/Tests/Prosite/Doc/prosite.excerpt.doc
/usr/share/biopython-1.58/Tests/Prosite/ps00107.txt
/usr/share/biopython-1.58/Tests/Prosite/ps00159.txt
/usr/share/biopython-1.58/Tests/Prosite/ps00165.txt
/usr/share/biopython-1.58/Tests/Prosite/ps00432.txt
/usr/share/biopython-1.58/Tests/Prosite/ps00488.txt
/usr/share/biopython-1.58/Tests/Prosite/ps00546.txt
/usr/share/biopython-1.58/Tests/Quality
/usr/share/biopython-1.58/Tests/Quality/error_diff_ids.fastq
/usr/share/biopython-1.58/Tests/Quality/error_double_qual.fastq
/usr/share/biopython-1.58/Tests/Quality/error_double_seq.fastq
/usr/share/biopython-1.58/Tests/Quality/error_long_qual.fastq
/usr/share/biopython-1.58/Tests/Quality/error_no_qual.fastq
/usr/share/biopython-1.58/Tests/Quality/error_qual_del.fastq
/usr/share/biopython-1.58/Tests/Quality/error_qual_escape.fastq
/usr/share/biopython-1.58/Tests/Quality/error_qual_null.fastq
/usr/share/biopython-1.58/Tests/Quality/error_qual_space.fastq
/usr/share/biopython-1.58/Tests/Quality/error_qual_tab.fastq
/usr/share/biopython-1.58/Tests/Quality/error_qual_unit_sep.fastq
/usr/share/biopython-1.58/Tests/Quality/error_qual_vtab.fastq
/usr/share/biopython-1.58/Tests/Quality/error_short_qual.fastq
/usr/share/biopython-1.58/Tests/Quality/error_spaces.fastq
/usr/share/biopython-1.58/Tests/Quality/error_tabs.fastq
/usr/share/biopython-1.58/Tests/Quality/error_trunc_at_plus.fastq
/usr/share/biopython-1.58/Tests/Quality/error_trunc_at_qual.fastq
/usr/share/biopython-1.58/Tests/Quality/error_trunc_at_seq.fastq
/usr/share/biopython-1.58/Tests/Quality/error_trunc_in_plus.fastq
/usr/share/biopython-1.58/Tests/Quality/error_trunc_in_qual.fastq
/usr/share/biopython-1.58/Tests/Quality/error_trunc_in_seq.fastq
/usr/share/biopython-1.58/Tests/Quality/error_trunc_in_title.fastq
/usr/share/biopython-1.58/Tests/Quality/example.fasta
/usr/share/biopython-1.58/Tests/Quality/example.fastq
/usr/share/biopython-1.58/Tests/Quality/example.qual
/usr/share/biopython-1.58/Tests/Quality/illumina_faked.fastq
/usr/share/biopython-1.58/Tests/Quality/illumina_full_range_as_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/illumina_full_range_as_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/illumina_full_range_as_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/illumina_full_range_original_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/longreads_as_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/longreads_as_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/longreads_as_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/longreads_original_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_dna_as_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_dna_as_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_dna_as_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_dna_original_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_rna_as_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_rna_as_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_rna_as_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/misc_rna_original_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/sanger_93.fastq
/usr/share/biopython-1.58/Tests/Quality/sanger_faked.fastq
/usr/share/biopython-1.58/Tests/Quality/sanger_full_range_as_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/sanger_full_range_as_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/sanger_full_range_as_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/sanger_full_range_original_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/solexa_example.fastq
/usr/share/biopython-1.58/Tests/Quality/solexa_faked.fastq
/usr/share/biopython-1.58/Tests/Quality/solexa_full_range_as_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/solexa_full_range_as_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/solexa_full_range_as_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/solexa_full_range_original_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/tricky.fastq
/usr/share/biopython-1.58/Tests/Quality/wrapping_as_illumina.fastq
/usr/share/biopython-1.58/Tests/Quality/wrapping_as_sanger.fastq
/usr/share/biopython-1.58/Tests/Quality/wrapping_as_solexa.fastq
/usr/share/biopython-1.58/Tests/Quality/wrapping_original_sanger.fastq
/usr/share/biopython-1.58/Tests/Rebase
/usr/share/biopython-1.58/Tests/Rebase/bamii.htm
/usr/share/biopython-1.58/Tests/Rebase/bamii.txt
/usr/share/biopython-1.58/Tests/Rebase/cac81.htm
/usr/share/biopython-1.58/Tests/Rebase/cac81.txt
/usr/share/biopython-1.58/Tests/Rebase/crei.htm
/usr/share/biopython-1.58/Tests/Rebase/crei.txt
/usr/share/biopython-1.58/Tests/Rebase/foki.htm
/usr/share/biopython-1.58/Tests/Rebase/foki.txt
/usr/share/biopython-1.58/Tests/Rebase/pvuii.htm
/usr/share/biopython-1.58/Tests/Rebase/pvuii.txt
/usr/share/biopython-1.58/Tests/Rebase/taqi.htm
/usr/share/biopython-1.58/Tests/Rebase/taqi.txt
/usr/share/biopython-1.58/Tests/Registry
/usr/share/biopython-1.58/Tests/Registry/EDD_RAT.dat
/usr/share/biopython-1.58/Tests/Registry/bt001
/usr/share/biopython-1.58/Tests/Registry/seqs.fasta
/usr/share/biopython-1.58/Tests/Roche
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_alt_index_at_end.sff
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_alt_index_at_start.sff
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_alt_index_in_middle.sff
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_index_at_start.sff
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_index_in_middle.sff
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_no_manifest.sff
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_random_10_reads.fasta
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_random_10_reads.qual
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_random_10_reads.sff
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.fasta
/usr/share/biopython-1.58/Tests/Roche/E3MFGYR02_random_10_reads_no_trim.qual
/usr/share/biopython-1.58/Tests/Roche/README.txt
/usr/share/biopython-1.58/Tests/Roche/greek.sff
/usr/share/biopython-1.58/Tests/Roche/paired.sff
/usr/share/biopython-1.58/Tests/SCOP
/usr/share/biopython-1.58/Tests/SCOP/dir.cla.scop.txt_test
/usr/share/biopython-1.58/Tests/SCOP/dir.des.scop.txt_test
/usr/share/biopython-1.58/Tests/SCOP/dir.hie.scop.txt_test
/usr/share/biopython-1.58/Tests/SCOP/raftest.txt
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-all-test.fa
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-10-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-100-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-20-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-25-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-30-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-35-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-40-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-50-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-70-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-90-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-bib-95-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0,7-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+0-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e+1-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-0,3-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1,3-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-1-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-10-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-15-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2,3-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-2-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-20-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-25-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-3-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-4-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-5-test.id
/usr/share/biopython-1.58/Tests/SCOP/scopseq-test/astral-scopdom-seqres-sel-gs-e100m-e-50-test.id
/usr/share/biopython-1.58/Tests/SCOP/testDom.txt
/usr/share/biopython-1.58/Tests/Saf
/usr/share/biopython-1.58/Tests/Saf/saf1.txt
/usr/share/biopython-1.58/Tests/SeqXML
/usr/share/biopython-1.58/Tests/SeqXML/corrupt_example1.xml
/usr/share/biopython-1.58/Tests/SeqXML/corrupt_example2.xml
/usr/share/biopython-1.58/Tests/SeqXML/dna_example.xml
/usr/share/biopython-1.58/Tests/SeqXML/global_species_example.xml
/usr/share/biopython-1.58/Tests/SeqXML/protein_example.xml
/usr/share/biopython-1.58/Tests/SeqXML/rna_example.xml
/usr/share/biopython-1.58/Tests/Stockholm
/usr/share/biopython-1.58/Tests/Stockholm/funny.sth
/usr/share/biopython-1.58/Tests/Stockholm/simple.sth
/usr/share/biopython-1.58/Tests/SubsMat
/usr/share/biopython-1.58/Tests/SubsMat/aaDistrib.txt
/usr/share/biopython-1.58/Tests/SubsMat/acc_rep_mat.pik
/usr/share/biopython-1.58/Tests/SubsMat/protein_count.txt
/usr/share/biopython-1.58/Tests/SubsMat/protein_freq.txt
/usr/share/biopython-1.58/Tests/SubsMat/redAADistrib.txt
/usr/share/biopython-1.58/Tests/SubsMat/redAltAADistrib.txt
/usr/share/biopython-1.58/Tests/SwissProt
/usr/share/biopython-1.58/Tests/SwissProt/Q13639.txt
/usr/share/biopython-1.58/Tests/SwissProt/Q13639.xml
/usr/share/biopython-1.58/Tests/SwissProt/README
/usr/share/biopython-1.58/Tests/SwissProt/keywlist.txt
/usr/share/biopython-1.58/Tests/SwissProt/keywlist2.txt
/usr/share/biopython-1.58/Tests/SwissProt/multi_ex.fasta
/usr/share/biopython-1.58/Tests/SwissProt/multi_ex.gff
/usr/share/biopython-1.58/Tests/SwissProt/multi_ex.list
/usr/share/biopython-1.58/Tests/SwissProt/multi_ex.rdf
/usr/share/biopython-1.58/Tests/SwissProt/multi_ex.txt
/usr/share/biopython-1.58/Tests/SwissProt/multi_ex.xml
/usr/share/biopython-1.58/Tests/SwissProt/sp001
/usr/share/biopython-1.58/Tests/SwissProt/sp002
/usr/share/biopython-1.58/Tests/SwissProt/sp003
/usr/share/biopython-1.58/Tests/SwissProt/sp004
/usr/share/biopython-1.58/Tests/SwissProt/sp005
/usr/share/biopython-1.58/Tests/SwissProt/sp006
/usr/share/biopython-1.58/Tests/SwissProt/sp007
/usr/share/biopython-1.58/Tests/SwissProt/sp008
/usr/share/biopython-1.58/Tests/SwissProt/sp009
/usr/share/biopython-1.58/Tests/SwissProt/sp010
/usr/share/biopython-1.58/Tests/SwissProt/sp011
/usr/share/biopython-1.58/Tests/SwissProt/sp012
/usr/share/biopython-1.58/Tests/SwissProt/sp013
/usr/share/biopython-1.58/Tests/SwissProt/sp014
/usr/share/biopython-1.58/Tests/SwissProt/sp015
/usr/share/biopython-1.58/Tests/SwissProt/sp016
/usr/share/biopython-1.58/Tests/SwissProt/uni001
/usr/share/biopython-1.58/Tests/SwissProt/uni002
/usr/share/biopython-1.58/Tests/UniGene
/usr/share/biopython-1.58/Tests/UniGene/Eca.1.2425.data
/usr/share/biopython-1.58/Tests/UniGene/Hs.2.data
/usr/share/biopython-1.58/Tests/UniGene/Mdm_partial.data
/usr/share/biopython-1.58/Tests/Wise
/usr/share/biopython-1.58/Tests/Wise/human_114_g01_exons.fna_01
/usr/share/biopython-1.58/Tests/Wise/human_114_g02_exons.fna_01
/usr/share/biopython-1.58/Tests/output
/usr/share/biopython-1.58/Tests/output/test_AlignIO
/usr/share/biopython-1.58/Tests/output/test_AlignIO_FastaIO
/usr/share/biopython-1.58/Tests/output/test_BioSQL_SeqIO
/usr/share/biopython-1.58/Tests/output/test_Clustalw
/usr/share/biopython-1.58/Tests/output/test_Clustalw_tool
/usr/share/biopython-1.58/Tests/output/test_CodonTable
/usr/share/biopython-1.58/Tests/output/test_CodonUsage
/usr/share/biopython-1.58/Tests/output/test_DocSQL
/usr/share/biopython-1.58/Tests/output/test_FSSP
/usr/share/biopython-1.58/Tests/output/test_File
/usr/share/biopython-1.58/Tests/output/test_GAQueens
/usr/share/biopython-1.58/Tests/output/test_GFF
/usr/share/biopython-1.58/Tests/output/test_GFF2
/usr/share/biopython-1.58/Tests/output/test_GenBank
/usr/share/biopython-1.58/Tests/output/test_HMMCasino
/usr/share/biopython-1.58/Tests/output/test_IsoelectricPoint
/usr/share/biopython-1.58/Tests/output/test_KDTree
/usr/share/biopython-1.58/Tests/output/test_KEGG
/usr/share/biopython-1.58/Tests/output/test_Location
/usr/share/biopython-1.58/Tests/output/test_LocationParser
/usr/share/biopython-1.58/Tests/output/test_MEME
/usr/share/biopython-1.58/Tests/output/test_NCBI_qblast
/usr/share/biopython-1.58/Tests/output/test_NNExclusiveOr
/usr/share/biopython-1.58/Tests/output/test_PDB
/usr/share/biopython-1.58/Tests/output/test_ParserSupport
/usr/share/biopython-1.58/Tests/output/test_ProtParam
/usr/share/biopython-1.58/Tests/output/test_SVDSuperimposer
/usr/share/biopython-1.58/Tests/output/test_SeqIO
/usr/share/biopython-1.58/Tests/output/test_SeqUtils
/usr/share/biopython-1.58/Tests/output/test_SubsMat
/usr/share/biopython-1.58/Tests/output/test_UniGene_obsolete
/usr/share/biopython-1.58/Tests/output/test_align
/usr/share/biopython-1.58/Tests/output/test_geo
/usr/share/biopython-1.58/Tests/output/test_property_manager
/usr/share/biopython-1.58/Tests/output/test_seq
/usr/share/biopython-1.58/Tests/output/test_translate
/usr/share/biopython-1.58/Tests/requires_internet.py
/usr/share/biopython-1.58/Tests/requires_wise.py
/usr/share/biopython-1.58/Tests/run_tests.py
/usr/share/biopython-1.58/Tests/seq_tests_common.py
/usr/share/biopython-1.58/Tests/setup_BioSQL.py
/usr/share/biopython-1.58/Tests/test_Ace.py
/usr/share/biopython-1.58/Tests/test_AlignIO.py
/usr/share/biopython-1.58/Tests/test_AlignIO_FastaIO.py
/usr/share/biopython-1.58/Tests/test_AlignIO_convert.py
/usr/share/biopython-1.58/Tests/test_BioSQL.py
/usr/share/biopython-1.58/Tests/test_BioSQL_SeqIO.py
/usr/share/biopython-1.58/Tests/test_CAPS.py
/usr/share/biopython-1.58/Tests/test_Chi2.py
/usr/share/biopython-1.58/Tests/test_Clustalw_tool.py
/usr/share/biopython-1.58/Tests/test_Clustalw_tool.py~
/usr/share/biopython-1.58/Tests/test_Cluster.py
/usr/share/biopython-1.58/Tests/test_CodonTable.py
/usr/share/biopython-1.58/Tests/test_CodonUsage.py
/usr/share/biopython-1.58/Tests/test_Compass.py
/usr/share/biopython-1.58/Tests/test_Crystal.py
/usr/share/biopython-1.58/Tests/test_Dialign_tool.py
/usr/share/biopython-1.58/Tests/test_DocSQL.py
/usr/share/biopython-1.58/Tests/test_Emboss.py
/usr/share/biopython-1.58/Tests/test_EmbossPhylipNew.py
/usr/share/biopython-1.58/Tests/test_EmbossPrimer.py
/usr/share/biopython-1.58/Tests/test_Entrez.py
/usr/share/biopython-1.58/Tests/test_Enzyme.py
/usr/share/biopython-1.58/Tests/test_FSSP.py
/usr/share/biopython-1.58/Tests/test_File.py
/usr/share/biopython-1.58/Tests/test_GACrossover.py
/usr/share/biopython-1.58/Tests/test_GAMutation.py
/usr/share/biopython-1.58/Tests/test_GAOrganism.py
/usr/share/biopython-1.58/Tests/test_GAQueens.py
/usr/share/biopython-1.58/Tests/test_GARepair.py
/usr/share/biopython-1.58/Tests/test_GASelection.py
/usr/share/biopython-1.58/Tests/test_GenBank.py
/usr/share/biopython-1.58/Tests/test_GenomeDiagram.py
/usr/share/biopython-1.58/Tests/test_GraphicsBitmaps.py
/usr/share/biopython-1.58/Tests/test_GraphicsChromosome.py
/usr/share/biopython-1.58/Tests/test_GraphicsDistribution.py
/usr/share/biopython-1.58/Tests/test_GraphicsGeneral.py
/usr/share/biopython-1.58/Tests/test_HMMCasino.py
/usr/share/biopython-1.58/Tests/test_HMMGeneral.py
/usr/share/biopython-1.58/Tests/test_HotRand.py
/usr/share/biopython-1.58/Tests/test_IsoelectricPoint.py
/usr/share/biopython-1.58/Tests/test_KDTree.py
/usr/share/biopython-1.58/Tests/test_KEGG.py
/usr/share/biopython-1.58/Tests/test_KeyWList.py
/usr/share/biopython-1.58/Tests/test_Location.py
/usr/share/biopython-1.58/Tests/test_LocationParser.py
/usr/share/biopython-1.58/Tests/test_LogisticRegression.py
/usr/share/biopython-1.58/Tests/test_Mafft_tool.py
/usr/share/biopython-1.58/Tests/test_MarkovModel.py
/usr/share/biopython-1.58/Tests/test_Medline.py
/usr/share/biopython-1.58/Tests/test_Motif.py
/usr/share/biopython-1.58/Tests/test_Muscle_tool.py
/usr/share/biopython-1.58/Tests/test_NCBIStandalone.py
/usr/share/biopython-1.58/Tests/test_NCBITextParser.py
/usr/share/biopython-1.58/Tests/test_NCBIXML.py
/usr/share/biopython-1.58/Tests/test_NCBI_BLAST_tools.py
/usr/share/biopython-1.58/Tests/test_NCBI_qblast.py
/usr/share/biopython-1.58/Tests/test_NNExclusiveOr.py
/usr/share/biopython-1.58/Tests/test_NNGene.py
/usr/share/biopython-1.58/Tests/test_NNGeneral.py
/usr/share/biopython-1.58/Tests/test_Nexus.py
/usr/share/biopython-1.58/Tests/test_PAML_baseml.py
/usr/share/biopython-1.58/Tests/test_PAML_codeml.py
/usr/share/biopython-1.58/Tests/test_PAML_tools.py
/usr/share/biopython-1.58/Tests/test_PAML_yn00.py
/usr/share/biopython-1.58/Tests/test_PDB.py
/usr/share/biopython-1.58/Tests/test_PDB_KDTree.py
/usr/share/biopython-1.58/Tests/test_ParserSupport.py
/usr/share/biopython-1.58/Tests/test_Pathway.py
/usr/share/biopython-1.58/Tests/test_Phd.py
/usr/share/biopython-1.58/Tests/test_Phylo.py
/usr/share/biopython-1.58/Tests/test_PhyloXML.py
/usr/share/biopython-1.58/Tests/test_Phylo_depend.py
/usr/share/biopython-1.58/Tests/test_PopGen_DFDist.py
/usr/share/biopython-1.58/Tests/test_PopGen_FDist.py
/usr/share/biopython-1.58/Tests/test_PopGen_FDist_nodepend.py
/usr/share/biopython-1.58/Tests/test_PopGen_GenePop.py
/usr/share/biopython-1.58/Tests/test_PopGen_GenePop_EasyController.py
/usr/share/biopython-1.58/Tests/test_PopGen_GenePop_nodepend.py
/usr/share/biopython-1.58/Tests/test_PopGen_SimCoal.py
/usr/share/biopython-1.58/Tests/test_PopGen_SimCoal_nodepend.py
/usr/share/biopython-1.58/Tests/test_Prank_tool.py
/usr/share/biopython-1.58/Tests/test_Probcons_tool.py
/usr/share/biopython-1.58/Tests/test_ProtParam.py
/usr/share/biopython-1.58/Tests/test_Restriction.py
/usr/share/biopython-1.58/Tests/test_SCOP_Astral.py
/usr/share/biopython-1.58/Tests/test_SCOP_Cla.py
/usr/share/biopython-1.58/Tests/test_SCOP_Des.py
/usr/share/biopython-1.58/Tests/test_SCOP_Dom.py
/usr/share/biopython-1.58/Tests/test_SCOP_Hie.py
/usr/share/biopython-1.58/Tests/test_SCOP_Raf.py
/usr/share/biopython-1.58/Tests/test_SCOP_Residues.py
/usr/share/biopython-1.58/Tests/test_SCOP_Scop.py
/usr/share/biopython-1.58/Tests/test_SVDSuperimposer.py
/usr/share/biopython-1.58/Tests/test_SeqIO.py
/usr/share/biopython-1.58/Tests/test_SeqIO_AbiIO.py
/usr/share/biopython-1.58/Tests/test_SeqIO_FastaIO.py
/usr/share/biopython-1.58/Tests/test_SeqIO_QualityIO.py
/usr/share/biopython-1.58/Tests/test_SeqIO_SeqXML.py
/usr/share/biopython-1.58/Tests/test_SeqIO_convert.py
/usr/share/biopython-1.58/Tests/test_SeqIO_features.py
/usr/share/biopython-1.58/Tests/test_SeqIO_index.py
/usr/share/biopython-1.58/Tests/test_SeqIO_online.py
/usr/share/biopython-1.58/Tests/test_SeqIO_write.py
/usr/share/biopython-1.58/Tests/test_SeqRecord.py
/usr/share/biopython-1.58/Tests/test_SeqUtils.py
/usr/share/biopython-1.58/Tests/test_Seq_objs.py
/usr/share/biopython-1.58/Tests/test_SubsMat.py
/usr/share/biopython-1.58/Tests/test_SwissProt.py
/usr/share/biopython-1.58/Tests/test_TCoffee_tool.py
/usr/share/biopython-1.58/Tests/test_Tutorial.py
/usr/share/biopython-1.58/Tests/test_UniGene.py
/usr/share/biopython-1.58/Tests/test_UniGene_obsolete.py
/usr/share/biopython-1.58/Tests/test_Uniprot.py
/usr/share/biopython-1.58/Tests/test_Wise.py
/usr/share/biopython-1.58/Tests/test_align.py
/usr/share/biopython-1.58/Tests/test_geo.py
/usr/share/biopython-1.58/Tests/test_kNN.py
/usr/share/biopython-1.58/Tests/test_lowess.py
/usr/share/biopython-1.58/Tests/test_pairwise2.py
/usr/share/biopython-1.58/Tests/test_prodoc.py
/usr/share/biopython-1.58/Tests/test_prosite1.py
/usr/share/biopython-1.58/Tests/test_prosite2.py
/usr/share/biopython-1.58/Tests/test_psw.py
/usr/share/biopython-1.58/Tests/test_seq.py
/usr/share/biopython-1.58/Tests/test_translate.py
/usr/share/biopython-1.58/Tests/test_trie.py