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Content of RPM rubygem-bio-1.5.1-1.1.x86_64.rpm :
/usr/bin/bioruby.ruby2.5
/usr/bin/br_biofetch.rb.ruby2.5
/usr/bin/br_bioflat.rb.ruby2.5
/usr/bin/br_biogetseq.rb.ruby2.5
/usr/bin/br_pmfetch.rb.ruby2.5
/usr/lib64/ruby/gems/2.5.0/cache/bio-1.5.1.gem
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/author-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/auto-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/cdesc-AAindex.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/comment-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/dblinks-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/definition-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/entry_id-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/journal-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/new-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex/title-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex1
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex1/cdesc-AAindex1.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex1/correlation_coefficient-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex1/index-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex1/new-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/%5b%5d-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/cdesc-AAindex2.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/cols-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/label_data-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/matrix-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/new-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/old_matrix-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/AAindex2/rows-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/cdesc-DirectoryEntry.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/data-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/data_offset-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/data_size-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/element_size-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/element_type-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/name-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/number_of_elements-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/DirectoryEntry/tag_number-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/cdesc-Abif.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/chemistry-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/data-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/get_directory_entries-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/get_entry_data-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/new-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Abif/sample_title-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/ArrayExtension
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/ArrayExtension/cdesc-ArrayExtension.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/ArrayExtension/each_seq-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/ArrayExtension/number_of_sequences-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/DEFAULT_PARSER
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/DEFAULT_PARSER/alignment-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/DEFAULT_PARSER/cdesc-DEFAULT_PARSER.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/DEFAULT_PARSER/determine_seq_method-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/DEFAULT_PARSER/do_parse-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/DEFAULT_PARSER/entries-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/DEFAULT_PARSER/new-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/_alignment_site-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_collect-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_concat-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_length-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_lstrip%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_normalize%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_rstrip%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_site-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_slice-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_strip%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_subseq-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/alignment_window-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/cdesc-EnumerableExtension.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/collect_each_site-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/consensus_each_site-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/consensus_iupac-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/consensus_string-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/convert_match-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/convert_unmatch-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/each_seq-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/each_site-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/each_site_step-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/each_window-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/lstrip%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/match_line-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/match_line_amino-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/match_line_nuc-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/normalize%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/number_of_sequences-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/remove_all_gaps%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/rstrip%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/seq_length-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/seqclass-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/sequence_names-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/slice-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/strip%21-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/subseq-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/EnumerableExtension/window-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOut
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOut/_option_input_stdin-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOut/_option_output_stdout-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOut/cdesc-FileInFileOut.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOutWithTree
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOutWithTree/_option_output_dndfile-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOutWithTree/_query_local-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOutWithTree/cdesc-FileInFileOutWithTree.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOutWithTree/output_dnd-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInFileOutWithTree/reset-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInStdoutOut
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInStdoutOut/_option_input_stdin-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/FileInStdoutOut/cdesc-FileInStdoutOut.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/_generate_options-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/_option_input_file-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/_option_input_stdin-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/_option_output_file-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/_option_output_stdout-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/_prepare_tempfile-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/cdesc-Simple.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/command-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/data_stdout-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/exec_local-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/exit_status-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/new-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/options-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/output-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/program-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/query-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/query_align-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/query_alignment-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/query_by_filename-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/query_string-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/report-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/Simple/reset-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/StdinInFileOut
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/StdinInFileOut/_option_output_stdout-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/StdinInFileOut/cdesc-StdinInFileOut.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/WrapInputStdin
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/WrapInputStdin/_query_string-i.ri
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/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/WrapInputTempfile
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/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/FactoryTemplate/WrapOutputTempfile
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/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/HashExtension
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/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/HashExtension/each_seq-i.ri
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/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/HashExtension/sequence_names-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/MultiFastaFormat
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/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/MultiFastaFormat/cdesc-MultiFastaFormat.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/MultiFastaFormat/determine_seq_method-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/MultiFastaFormat/do_parse-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/MultiFastaFormat/entries-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/MultiFastaFormat/new-c.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/%3c%3c-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/%3d%3d-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/%5b%5d-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/__store__-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/add_seq-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/add_sequences-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/alignment_collect-i.ri
/usr/lib64/ruby/gems/2.5.0/doc/bio-1.5.1/ri/Bio/Alignment/OriginalAlignment/cdesc-OriginalAlignment.ri
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