SEARCH
NEW RPMS
DIRECTORIES
ABOUT
FAQ
VARIOUS
BLOG

 
 
Content of RPM R-GenomicAlignments-1.28.0-2.fc35.x86_64.rpm :
/usr/lib/.build-id
/usr/lib/.build-id/20
/usr/lib/.build-id/20/1adff1f141348e1c80c896f3323d2579c24116
/usr/lib64/R/library/GenomicAlignments
/usr/lib64/R/library/GenomicAlignments/CITATION
/usr/lib64/R/library/GenomicAlignments/DESCRIPTION
/usr/lib64/R/library/GenomicAlignments/INDEX
/usr/lib64/R/library/GenomicAlignments/Meta
/usr/lib64/R/library/GenomicAlignments/Meta/Rd.rds
/usr/lib64/R/library/GenomicAlignments/Meta/features.rds
/usr/lib64/R/library/GenomicAlignments/Meta/hsearch.rds
/usr/lib64/R/library/GenomicAlignments/Meta/links.rds
/usr/lib64/R/library/GenomicAlignments/Meta/nsInfo.rds
/usr/lib64/R/library/GenomicAlignments/Meta/package.rds
/usr/lib64/R/library/GenomicAlignments/Meta/vignette.rds
/usr/lib64/R/library/GenomicAlignments/NAMESPACE
/usr/lib64/R/library/GenomicAlignments/NEWS
/usr/lib64/R/library/GenomicAlignments/R
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments.rdb
/usr/lib64/R/library/GenomicAlignments/R/GenomicAlignments.rdx
/usr/lib64/R/library/GenomicAlignments/doc
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.R
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/GenomicAlignmentsIntroduction.pdf
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.R
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/OverlapEncodings.pdf
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.R
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/WorkingWithAlignedNucleotides.pdf
/usr/lib64/R/library/GenomicAlignments/doc/index.html
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.R
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.Rnw
/usr/lib64/R/library/GenomicAlignments/doc/summarizeOverlaps.pdf
/usr/lib64/R/library/GenomicAlignments/extdata
/usr/lib64/R/library/GenomicAlignments/extdata/sm_treated1.bam
/usr/lib64/R/library/GenomicAlignments/extdata/sm_untreated1.bam
/usr/lib64/R/library/GenomicAlignments/help
/usr/lib64/R/library/GenomicAlignments/help/AnIndex
/usr/lib64/R/library/GenomicAlignments/help/CIGAR_OPS.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentPairs-class.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentPairs.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignments-class.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentsList-class.html
/usr/lib64/R/library/GenomicAlignments/help/GAlignmentsList.html
/usr/lib64/R/library/GenomicAlignments/help/GappedReads-class.html
/usr/lib64/R/library/GenomicAlignments/help/GappedReads.html
/usr/lib64/R/library/GenomicAlignments/help/GenomicAlignments.rdb
/usr/lib64/R/library/GenomicAlignments/help/GenomicAlignments.rdx
/usr/lib64/R/library/GenomicAlignments/help/IntersectionNotEmpty.html
/usr/lib64/R/library/GenomicAlignments/help/IntersectionStrict.html
/usr/lib64/R/library/GenomicAlignments/help/Lencoding.html
/usr/lib64/R/library/GenomicAlignments/help/Lnjunc.html
/usr/lib64/R/library/GenomicAlignments/help/Loffset,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/Loffset.html
/usr/lib64/R/library/GenomicAlignments/help/NATURAL_INTRON_MOTIFS.html
/usr/lib64/R/library/GenomicAlignments/help/OverlapEncodings-class.html
/usr/lib64/R/library/GenomicAlignments/help/OverlapEncodings.html
/usr/lib64/R/library/GenomicAlignments/help/Rencoding.html
/usr/lib64/R/library/GenomicAlignments/help/Rnjunc.html
/usr/lib64/R/library/GenomicAlignments/help/Roffset,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/Roffset.html
/usr/lib64/R/library/GenomicAlignments/help/Union.html
/usr/lib64/R/library/GenomicAlignments/help/[[,GAlignmentPairs,ANY,ANY-method.html
/usr/lib64/R/library/GenomicAlignments/help/aliases.rds
/usr/lib64/R/library/GenomicAlignments/help/alphabetFrequencyFromBam.html
/usr/lib64/R/library/GenomicAlignments/help/as.data.frame,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/as.data.frame,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/as.data.frame,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/as.data.frame.OverlapEncodings.html
/usr/lib64/R/library/GenomicAlignments/help/bindROWS,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/bindROWS,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/c,GappedReads-method.html
/usr/lib64/R/library/GenomicAlignments/help/cigar,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/cigar,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/cigar-utils.html
/usr/lib64/R/library/GenomicAlignments/help/cigar.html
/usr/lib64/R/library/GenomicAlignments/help/cigarNarrow.html
/usr/lib64/R/library/GenomicAlignments/help/cigarOpTable.html
/usr/lib64/R/library/GenomicAlignments/help/cigarQNarrow.html
/usr/lib64/R/library/GenomicAlignments/help/cigarRangesAlongPairwiseSpace.html
/usr/lib64/R/library/GenomicAlignments/help/cigarRangesAlongQuerySpace.html
/usr/lib64/R/library/GenomicAlignments/help/cigarRangesAlongReferenceSpace.html
/usr/lib64/R/library/GenomicAlignments/help/cigarToRleList.html
/usr/lib64/R/library/GenomicAlignments/help/cigarWidthAlongPairwiseSpace.html
/usr/lib64/R/library/GenomicAlignments/help/cigarWidthAlongQuerySpace.html
/usr/lib64/R/library/GenomicAlignments/help/cigarWidthAlongReferenceSpace.html
/usr/lib64/R/library/GenomicAlignments/help/class:GAlignmentPairs.html
/usr/lib64/R/library/GenomicAlignments/help/class:GAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/class:GAlignmentsList.html
/usr/lib64/R/library/GenomicAlignments/help/class:GappedReads.html
/usr/lib64/R/library/GenomicAlignments/help/class:OverlapEncodings.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentPairs,DataFrame-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentPairs,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentPairs,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentPairs,GRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentPairs,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentPairs,IntegerRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignments,DataFrame-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignments,GRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignments,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignments,IntegerRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignments,IntegerRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentsList,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentsList,GRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentsList,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentsList,IntegerRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GAlignmentsList,IntegerRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,GenomicRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/coerce,list,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coordinate-mapping-methods.html
/usr/lib64/R/library/GenomicAlignments/help/countCompatibleOverlaps.html
/usr/lib64/R/library/GenomicAlignments/help/countDumpedAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/coverage,BamFile-method.html
/usr/lib64/R/library/GenomicAlignments/help/coverage,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/coverage,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/coverage,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/coverage,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/coverage-methods.html
/usr/lib64/R/library/GenomicAlignments/help/coverage.html
/usr/lib64/R/library/GenomicAlignments/help/elementMetadata,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/elementMetadata<-,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodeOverlaps,GRangesList,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodeOverlaps,IntegerRanges,IntegerRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodeOverlaps,IntegerRangesList,IntegerRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodeOverlaps,IntegerRangesList,IntegerRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodeOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/help/encodeOverlaps.html
/usr/lib64/R/library/GenomicAlignments/help/encodeOverlaps1.html
/usr/lib64/R/library/GenomicAlignments/help/encoding,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodingHalves,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodingHalves,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodingHalves,factor-method.html
/usr/lib64/R/library/GenomicAlignments/help/encodingHalves.html
/usr/lib64/R/library/GenomicAlignments/help/explodeCigarOpLengths.html
/usr/lib64/R/library/GenomicAlignments/help/explodeCigarOps.html
/usr/lib64/R/library/GenomicAlignments/help/extractAlignmentRangesOnReference.html
/usr/lib64/R/library/GenomicAlignments/help/extractQueryStartInTranscript.html
/usr/lib64/R/library/GenomicAlignments/help/extractSkippedExonRanks,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSkippedExonRanks,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSkippedExonRanks,factor-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSkippedExonRanks.html
/usr/lib64/R/library/GenomicAlignments/help/extractSpannedExonRanks,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSpannedExonRanks,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSpannedExonRanks,factor-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSpannedExonRanks.html
/usr/lib64/R/library/GenomicAlignments/help/extractSteppedExonRanks,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSteppedExonRanks,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSteppedExonRanks,factor-method.html
/usr/lib64/R/library/GenomicAlignments/help/extractSteppedExonRanks.html
/usr/lib64/R/library/GenomicAlignments/help/findCompatibleOverlaps,GAlignmentPairs,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/findCompatibleOverlaps,GAlignments,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/findCompatibleOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/help/findCompatibleOverlaps.html
/usr/lib64/R/library/GenomicAlignments/help/findMateAlignment.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,GAlignmentPairs,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,GAlignmentPairs,Vector-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,GAlignments,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,GAlignments,Vector-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,GAlignmentsList,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,GAlignmentsList,Vector-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,Vector,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,Vector,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps,Vector,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/help/findOverlaps.html
/usr/lib64/R/library/GenomicAlignments/help/findSpliceOverlaps,BamFile,ANY-method.html
/usr/lib64/R/library/GenomicAlignments/help/findSpliceOverlaps,GAlignmentPairs,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/findSpliceOverlaps,GAlignments,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/findSpliceOverlaps,GRangesList,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/findSpliceOverlaps,character,ANY-method.html
/usr/lib64/R/library/GenomicAlignments/help/findSpliceOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/help/findSpliceOverlaps.html
/usr/lib64/R/library/GenomicAlignments/help/first,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/first.html
/usr/lib64/R/library/GenomicAlignments/help/flipQuery.html
/usr/lib64/R/library/GenomicAlignments/help/flippedQuery,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/flippedQuery.html
/usr/lib64/R/library/GenomicAlignments/help/flushDumpedAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/getDumpedAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/getListElement,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/granges,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/granges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/granges,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/grglist,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/grglist,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/grglist,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/intra-range-methods.html
/usr/lib64/R/library/GenomicAlignments/help/invertStrand,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/is.unsorted,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSkippedExons,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSkippedExons,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSkippedExons,factor-method.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSkippedExons.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSplicing,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSplicing,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSplicing,factor-method.html
/usr/lib64/R/library/GenomicAlignments/help/isCompatibleWithSplicing.html
/usr/lib64/R/library/GenomicAlignments/help/isProperPair,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/isProperPair.html
/usr/lib64/R/library/GenomicAlignments/help/junctions,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/junctions,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/junctions,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/junctions-methods.html
/usr/lib64/R/library/GenomicAlignments/help/junctions.html
/usr/lib64/R/library/GenomicAlignments/help/last,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/last.html
/usr/lib64/R/library/GenomicAlignments/help/levels,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/levels.OverlapEncodings.html
/usr/lib64/R/library/GenomicAlignments/help/makeGAlignmentPairs.html
/usr/lib64/R/library/GenomicAlignments/help/mapFromAlignments,GenomicRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/mapFromAlignments,IntegerRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/mapFromAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/mapToAlignments,GenomicRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/mapToAlignments,IntegerRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/mapToAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/names,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/names,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/names,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/names<-,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/names<-,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/names<-,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/narrow,GappedReads-method.html
/usr/lib64/R/library/GenomicAlignments/help/njunc,ANY-method.html
/usr/lib64/R/library/GenomicAlignments/help/njunc,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/njunc,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/njunc,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/njunc.html
/usr/lib64/R/library/GenomicAlignments/help/order,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/parallel_slot_names,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/parallel_slot_names,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/parallel_slot_names,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/paths.rds
/usr/lib64/R/library/GenomicAlignments/help/pcompare,GAlignments,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/pileLettersAt.html
/usr/lib64/R/library/GenomicAlignments/help/pintersect,GAlignments,GRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/pintersect,GRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/pintersect.html
/usr/lib64/R/library/GenomicAlignments/help/pmapFromAlignments,GenomicRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/pmapFromAlignments,IntegerRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/pmapFromAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/pmapToAlignments,GenomicRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/pmapToAlignments,IntegerRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/pmapToAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/qnarrow,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/qnarrow,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/qnarrow,GappedReads-method.html
/usr/lib64/R/library/GenomicAlignments/help/qnarrow.html
/usr/lib64/R/library/GenomicAlignments/help/qseq,GappedReads-method.html
/usr/lib64/R/library/GenomicAlignments/help/qseq.html
/usr/lib64/R/library/GenomicAlignments/help/queryLoc2refLoc.html
/usr/lib64/R/library/GenomicAlignments/help/queryLocs2refLocs.html
/usr/lib64/R/library/GenomicAlignments/help/qwidth,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/qwidth,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/qwidth,GappedReads-method.html
/usr/lib64/R/library/GenomicAlignments/help/qwidth.html
/usr/lib64/R/library/GenomicAlignments/help/ranges,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/ranges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/ranges,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/rank,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignmentPairs,BamFile-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignmentPairs,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignmentPairs.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignments,BamFile-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignments,BamViews-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignments,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignmentsList,BamFile-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignmentsList,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGAlignmentsList.html
/usr/lib64/R/library/GenomicAlignments/help/readGappedReads,BamFile-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGappedReads,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/readGappedReads.html
/usr/lib64/R/library/GenomicAlignments/help/readSTARJunctions.html
/usr/lib64/R/library/GenomicAlignments/help/readTopHatJunctions.html
/usr/lib64/R/library/GenomicAlignments/help/relistToClass,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/rglist,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/rglist,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/rname,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/rname,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/rname.html
/usr/lib64/R/library/GenomicAlignments/help/rname<-,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/rname<-,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/rname<-.html
/usr/lib64/R/library/GenomicAlignments/help/second,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/second.html
/usr/lib64/R/library/GenomicAlignments/help/selectEncodingWithCompatibleStrand.html
/usr/lib64/R/library/GenomicAlignments/help/seqinfo,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqinfo,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqinfo,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqinfo<-,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqinfo<-,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqinfo<-,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqlevelsInUse,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqnames,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqnames,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqnames,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqnames<-,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/seqnames<-,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/sequenceLayer.html
/usr/lib64/R/library/GenomicAlignments/help/setops-methods.html
/usr/lib64/R/library/GenomicAlignments/help/show,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/show,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/show,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/show,OverlapEncodings-method.html
/usr/lib64/R/library/GenomicAlignments/help/sort,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/stackStringsFromBam.html
/usr/lib64/R/library/GenomicAlignments/help/stackStringsFromGAlignments.html
/usr/lib64/R/library/GenomicAlignments/help/start,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/strand,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/strand,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/strand,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/strand<-,GAlignments,ANY-method.html
/usr/lib64/R/library/GenomicAlignments/help/strand<-,GAlignmentsList,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/strand<-,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/strandMode,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/strandMode.html
/usr/lib64/R/library/GenomicAlignments/help/strandMode<-,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/strandMode<-.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeJunctions.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,BamViews,missing-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,BamFile-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,BamFileList-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,GRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRanges,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,BamFile-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,BamFileList-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,GAlignmentsList-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,GRanges-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,GRangesList-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps,GRangesList,character-method.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/help/summarizeOverlaps.html
/usr/lib64/R/library/GenomicAlignments/help/unlist,GAlignmentPairs-method.html
/usr/lib64/R/library/GenomicAlignments/help/update,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/updateObject,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/validCigar.html
/usr/lib64/R/library/GenomicAlignments/help/width,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/help/windows,GAlignments-method.html
/usr/lib64/R/library/GenomicAlignments/html
/usr/lib64/R/library/GenomicAlignments/html/00Index.html
/usr/lib64/R/library/GenomicAlignments/html/GAlignmentPairs-class.html
/usr/lib64/R/library/GenomicAlignments/html/GAlignments-class.html
/usr/lib64/R/library/GenomicAlignments/html/GAlignmentsList-class.html
/usr/lib64/R/library/GenomicAlignments/html/GappedReads-class.html
/usr/lib64/R/library/GenomicAlignments/html/OverlapEncodings-class.html
/usr/lib64/R/library/GenomicAlignments/html/R.css
/usr/lib64/R/library/GenomicAlignments/html/cigar-utils.html
/usr/lib64/R/library/GenomicAlignments/html/coordinate-mapping-methods.html
/usr/lib64/R/library/GenomicAlignments/html/coverage-methods.html
/usr/lib64/R/library/GenomicAlignments/html/encodeOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/html/findCompatibleOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/html/findMateAlignment.html
/usr/lib64/R/library/GenomicAlignments/html/findOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/html/findSpliceOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/html/intra-range-methods.html
/usr/lib64/R/library/GenomicAlignments/html/junctions-methods.html
/usr/lib64/R/library/GenomicAlignments/html/pileLettersAt.html
/usr/lib64/R/library/GenomicAlignments/html/readGAlignments.html
/usr/lib64/R/library/GenomicAlignments/html/sequenceLayer.html
/usr/lib64/R/library/GenomicAlignments/html/setops-methods.html
/usr/lib64/R/library/GenomicAlignments/html/stackStringsFromGAlignments.html
/usr/lib64/R/library/GenomicAlignments/html/summarizeOverlaps-methods.html
/usr/lib64/R/library/GenomicAlignments/libs
/usr/lib64/R/library/GenomicAlignments/libs/GenomicAlignments.so
/usr/lib64/R/library/GenomicAlignments/unitTests
/usr/lib64/R/library/GenomicAlignments/unitTests/test_GAlignments-class.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_GAlignmentsList-class.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_cigar-utils.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_coordinate-mapping-methods.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_findSpliceOverlaps-methods.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_intra-range-methods.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_readGAlignmentPairs.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_readGAlignments.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_readGAlignmentsList.R
/usr/lib64/R/library/GenomicAlignments/unitTests/test_summarizeOverlaps-methods.R

 
ICM