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Content of RPM R-varitas-0.0.2-lp155.17.1.x86_64.rpm :
/usr/lib64/R/library/varitas
/usr/lib64/R/library/varitas/DESCRIPTION
/usr/lib64/R/library/varitas/INDEX
/usr/lib64/R/library/varitas/Meta
/usr/lib64/R/library/varitas/Meta/Rd.rds
/usr/lib64/R/library/varitas/Meta/features.rds
/usr/lib64/R/library/varitas/Meta/hsearch.rds
/usr/lib64/R/library/varitas/Meta/links.rds
/usr/lib64/R/library/varitas/Meta/nsInfo.rds
/usr/lib64/R/library/varitas/Meta/package.rds
/usr/lib64/R/library/varitas/Meta/vignette.rds
/usr/lib64/R/library/varitas/NAMESPACE
/usr/lib64/R/library/varitas/NEWS
/usr/lib64/R/library/varitas/R
/usr/lib64/R/library/varitas/R/varitas
/usr/lib64/R/library/varitas/R/varitas.rdb
/usr/lib64/R/library/varitas/R/varitas.rdx
/usr/lib64/R/library/varitas/ascii_logo.txt
/usr/lib64/R/library/varitas/config.yaml
/usr/lib64/R/library/varitas/ctdna_defaults.yaml
/usr/lib64/R/library/varitas/doc
/usr/lib64/R/library/varitas/doc/errors.R
/usr/lib64/R/library/varitas/doc/errors.Rmd
/usr/lib64/R/library/varitas/doc/errors.html
/usr/lib64/R/library/varitas/doc/index.html
/usr/lib64/R/library/varitas/doc/introduction.R
/usr/lib64/R/library/varitas/doc/introduction.Rmd
/usr/lib64/R/library/varitas/doc/introduction.html
/usr/lib64/R/library/varitas/extdata
/usr/lib64/R/library/varitas/extdata/bam
/usr/lib64/R/library/varitas/extdata/bam/Sample_1.bam
/usr/lib64/R/library/varitas/extdata/bam/Sample_2.bam
/usr/lib64/R/library/varitas/extdata/fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample001_R1.fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample001_R2.fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample002_R1.fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample002_R2.fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample003_R1.fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample003_R2.fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample004_R1.fastq
/usr/lib64/R/library/varitas/extdata/fastq/2018_Sample004_R2.fastq
/usr/lib64/R/library/varitas/extdata/miniseq
/usr/lib64/R/library/varitas/extdata/miniseq/Example_template.csv
/usr/lib64/R/library/varitas/extdata/miniseq/fastq
/usr/lib64/R/library/varitas/extdata/miniseq/fastq/001_S1_L001_R1_example.fastq
/usr/lib64/R/library/varitas/extdata/miniseq/fastq/001_S1_L001_R2_example.fastq
/usr/lib64/R/library/varitas/extdata/miniseq/fastq/002_S1_L001_R1_example.fastq
/usr/lib64/R/library/varitas/extdata/miniseq/fastq/002_S1_L001_R2_example.fastq
/usr/lib64/R/library/varitas/extdata/miniseq/isis
/usr/lib64/R/library/varitas/extdata/miniseq/isis/001_S1_example.vcf
/usr/lib64/R/library/varitas/extdata/miniseq/isis/002_S1_example.vcf
/usr/lib64/R/library/varitas/extdata/vcf
/usr/lib64/R/library/varitas/extdata/vcf/Sample_1.vcf
/usr/lib64/R/library/varitas/extdata/vcf/Sample_2.vcf
/usr/lib64/R/library/varitas/help
/usr/lib64/R/library/varitas/help/AnIndex
/usr/lib64/R/library/varitas/help/aliases.rds
/usr/lib64/R/library/varitas/help/paths.rds
/usr/lib64/R/library/varitas/help/varitas.rdb
/usr/lib64/R/library/varitas/help/varitas.rdx
/usr/lib64/R/library/varitas/html
/usr/lib64/R/library/varitas/html/00Index.html
/usr/lib64/R/library/varitas/html/R.css
/usr/lib64/R/library/varitas/perl
/usr/lib64/R/library/varitas/perl/filter.pl
/usr/lib64/R/library/varitas/perl/run_alignment.pl
/usr/lib64/R/library/varitas/perl/run_annovar.pl
/usr/lib64/R/library/varitas/perl/run_annovar_isis.pl
/usr/lib64/R/library/varitas/perl/run_iDES_sample.pl
/usr/lib64/R/library/varitas/perl/run_lofreq.pl
/usr/lib64/R/library/varitas/perl/run_muse.pl
/usr/lib64/R/library/varitas/perl/run_mutect.pl
/usr/lib64/R/library/varitas/perl/run_post_processing.pl
/usr/lib64/R/library/varitas/perl/run_vardict.pl
/usr/lib64/R/library/varitas/perl/run_varscan.pl
/usr/lib64/R/library/varitas/perl/target_qc.pl
/usr/lib64/R/library/varitas/perl/var2vcf_valid.pl
/usr/lib64/R/library/varitas/report_template.Rmd
/usr/lib64/R/library/varitas/tumour_defaults.yaml

 
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