| Name : Gambit
| |
| Version : 0.4.145
| Vendor : obs://build_opensuse_org/science
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| Release : 1.2
| Date : 2012-05-13 16:55:40
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| Group : Productivity/Scientific/Other
| Source RPM : Gambit-0.4.145-1.2.src.rpm
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| Size : 0.86 MB
| |
| Packager : (none)
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| Summary : GUI application for sequence visualization and analysis
|
Description :
This software takes advantage of the indexing features of the (fairly) recently standardized BAM sequence alignment format that allows rapid access to genomic data, with minimal startup time and re-rendering delay. Gambit also supports a variety of annotation formats (BED, GFF, GFF3, VCF) “out-of-the-box” for displaying gene/region annotations as well as SNP entries.
Bioinformatics analysis of sequence data currently requires specialized expertise and is rapidly becoming a bottleneck. Analysis needs of smaller biology laboratories can be served if the visualization software integrates essential analytical functionality. Such functionality includes PCR primer design to support candidate SNP validation experiments; connecting to common databases; exporting data from specific regions of the chromosome for detailed and focused analysis.
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RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/science/SLE_11/i586 |
Hmm ... It's impossible ;-) This RPM doesn't exist on any FTP server
Provides :
libgambit_fileformat_bam.so
libgambit_fileformat_bed.so
libgambit_fileformat_fasta.so
libgambit_fileformat_gff.so
libgambit_fileformat_gff3.so
libgambit_fileformat_vcf.so
Gambit
Requires :
