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mmseq rpm build for : RedHat EL 5. For other distributions click mmseq.

Name : mmseq
Version : 0.9.14 Vendor : Fedora Project
Release : 1.el5 Date : 2011-10-07 18:29:13
Group : Applications/Engineering Source RPM : mmseq-0.9.14-1.el5.src.rpm
Size : 0.41 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/epel/5/i386

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-0.9.14-1.el5.i386.rpm
     Search for other platforms
mmseq-0.9.14-1.el5.sparc.rpm
mmseq-0.9.14-1.el5.alpha.rpm
mmseq-0.9.14-1.el5.ppc.rpm
mmseq-0.9.14-1.el5.ia64.rpm
mmseq-0.9.14-1.el5.s390.rpm

Provides :
mmseq

Requires :
ruby
libstdc++.so.6(GLIBCXX_3.4)
libpthread.so.0
libgomp.so.1(OMP_1.0)
libc.so.6(GLIBC_2.0)
/usr/bin/env
rtld(GNU_HASH)
libpthread.so.0(GLIBC_2.0)
libgsl.so.0
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libgomp.so.1
libm.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.3)
libgslcblas.so.0
libm.so.6
libbam.so.1
samtools
rpmlib(CompressedFileNames) <= 3.0.4-1
libstdc++.so.6
libc.so.6(GLIBC_2.4)
libc.so.6(GLIBC_2.1)
perl
libgcc_s.so.1
libc.so.6(GLIBC_2.1.3)
libgomp.so.1(GOMP_1.0)
libgcc_s.so.1(GCC_3.0)
/bin/bash
libstdc++.so.6(CXXABI_1.3)
perl(strict)
libc.so.6
libboost_regex.so.5


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/get_isize.rb
/usr/bin/haploref.rb
/usr/bin/mmseq
/usr/bin/pileup.sh
/usr/bin/routeB.sh
/usr/bin/testregexp.rb
/usr/share/doc/mmseq-0.9.14
/usr/share/doc/mmseq-0.9.14/AUTHORS
/usr/share/doc/mmseq-0.9.14/COPYING

 
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