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samtools rpm build for : Fedora 14. For other distributions click samtools.

Name : samtools
Version : 0.1.8 Vendor : Fedora Project
Release : 1.fc14 Date : 2010-08-17 11:16:49
Group : Applications/Engineering Source RPM : samtools-0.1.8-1.fc14.src.rpm
Size : 0.65 MB
Packager : Fedora Project
Summary : Tools for nucleotide sequence alignments in the SAM format
Description :
SAM (Sequence Alignment/Map) is a flexible generic format for storing
nucleotide sequence alignment. SAM tools provide efficient utilities on
manipulating alignments in the SAM format.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/14/Everything/i386/os/Packages

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  samtools-0.1.8-1.fc14.i686.rpm
     Search for other platforms
samtools-0.1.8-1.fc14.sparc.rpm
samtools-0.1.8-1.fc14.alpha.rpm
samtools-0.1.8-1.fc14.ppc.rpm
samtools-0.1.8-1.fc14.ia64.rpm
samtools-0.1.8-1.fc14.s390.rpm

Provides :
samtools
samtools(x86-32)

Requires :
perl(Getopt::Long)
libncurses.so.5
perl(File::Spec)
/usr/bin/env
rtld(GNU_HASH)
/usr/bin/perl
libtinfo.so.5
libm.so.6
libc.so.6(GLIBC_2.4)
libgcc_s.so.1(GCC_3.3.1)
perl(warnings)
perl(constant)
perl(Carp)
libgcc_s.so.1
libz.so.1
/usr/bin/python
rpmlib(PayloadIsXz) <= 5.2-1
perl(Data::Dumper)
libc.so.6(GLIBC_2.7)
perl(Getopt::Std)
libc.so.6(GLIBC_2.0)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libc.so.6(GLIBC_2.3)
libm.so.6(GLIBC_2.0)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
perl(List::Util)
libz.so.1(ZLIB_1.2.2)
libc.so.6(GLIBC_2.1)
libz.so.1(ZLIB_1.2.3.3)
libgcc_s.so.1(GCC_3.0)
libc.so.6
perl(strict)
libc.so.6(GLIBC_2.3.4)


Content of RPM :
/usr/bin/blast2sam.pl
/usr/bin/bowtie2sam.pl
/usr/bin/export2sam.pl
/usr/bin/interpolate_sam.pl
/usr/bin/maq2sam-long
/usr/bin/maq2sam-short
/usr/bin/md5fa
/usr/bin/md5sum-lite
/usr/bin/novo2sam.pl
/usr/bin/psl2sam.pl
/usr/bin/razip
/usr/bin/sam2vcf.pl
/usr/bin/samtools
/usr/bin/samtools.pl
/usr/bin/soap2sam.pl
/usr/bin/varfilter.py
/usr/bin/wgsim
/usr/bin/wgsim_eval.pl
/usr/bin/zoom2sam.pl
/usr/share/doc/samtools-0.1.8
/usr/share/doc/samtools-0.1.8/AUTHORS
/usr/share/doc/samtools-0.1.8/COPYING
/usr/share/doc/samtools-0.1.8/ChangeLog
/usr/share/doc/samtools-0.1.8/INSTALL
/usr/share/doc/samtools-0.1.8/NEWS
/usr/share/doc/samtools-0.1.8/examples
/usr/share/doc/samtools-0.1.8/examples/00README.txt
/usr/share/doc/samtools-0.1.8/examples/Makefile
/usr/share/doc/samtools-0.1.8/examples/bam2bed.c
/usr/share/doc/samtools-0.1.8/examples/calDepth.c
There is 6 files more in these RPM.

  
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