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lagan rpm build for : Fedora 15. For other distributions click lagan.

Name : lagan
Version : 2.0 Vendor : Fedora Project
Release : 7.fc15 Date : 2011-02-08 06:40:51
Group : Applications/Engineering Source RPM : lagan-2.0-7.fc15.src.rpm
Size : 0.55 MB
Packager : Fedora Project
Summary : Local, global, and multiple alignment of DNA sequences
Description :
LAGAN toolkit is a set of tools for local, global, and multiple alignment of
DNA sequences. Please visit http://lagan.stanford.edu for publications
describing LAGAN and its components.

The 4 main parts of LAGAN are:

1. CHAOS local alignment tool
2. LAGAN pairwise global alignment tool
3. MLAGAN multiple global alignment tool.
4. Shuffle-LAGAN pairwise glocal alignment

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/15/Everything/i386/os/Packages

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  lagan-2.0-7.fc15.i686.rpm
     Search for other platforms
lagan-2.0-7.fc15.sparc.rpm
lagan-2.0-7.fc15.alpha.rpm
lagan-2.0-7.fc15.ppc.rpm
lagan-2.0-7.fc15.ia64.rpm
lagan-2.0-7.fc15.s390.rpm

Provides :
lagan
lagan(x86-32)

Requires :
perl(Getopt::Long)
libstdc++.so.6(GLIBCXX_3.4)
/usr/bin/env
rtld(GNU_HASH)
/usr/bin/perl
libm.so.6
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.9)
libc.so.6(GLIBC_2.4)
perl(warnings)
perl(IO::Handle)
perl(constant)
libgcc_s.so.1
libc.so.6(GLIBC_2.1.3)
rpmlib(PayloadIsXz) <= 5.2-1
perl(IPC::Open2)
libc.so.6(GLIBC_2.7)
libc.so.6(GLIBC_2.0)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
perl => 0:5.005
libc.so.6(GLIBC_2.3)
libm.so.6(GLIBC_2.0)
perl(File::Basename)
perl(Cwd)
perl(File::Path)
rpmlib(FileDigests) <= 4.6.0-1
libstdc++.so.6
rpmlib(CompressedFileNames) <= 3.0.4-1
libc.so.6(GLIBC_2.1)
perl(File::Copy)
libstdc++.so.6(GLIBCXX_3.4.11)
libgcc_s.so.1(GCC_3.0)
libstdc++.so.6(CXXABI_1.3)
libc.so.6
perl(strict)
libc.so.6(GLIBC_2.3.4)


Content of RPM :
/usr/bin/chaos
/usr/bin/lagan
/usr/bin/mlagan
/usr/bin/prolagan
/usr/bin/slagan
/usr/lib/lagan
/usr/lib/lagan/anal_gloc.pl
/usr/lib/lagan/anchors
/usr/lib/lagan/blosum62.txt
/usr/lib/lagan/blosum62s.txt
/usr/lib/lagan/glocal
/usr/lib/lagan/nucmatrix.txt
/usr/lib/lagan/order
/usr/lib/lagan/rechaos.pl
/usr/lib/lagan/supermap.pl
/usr/lib/lagan/test.score
/usr/lib/lagan/utils
/usr/lib/lagan/utils/Glue
/usr/lib/lagan/utils/bin2bl
/usr/lib/lagan/utils/bin2mf
/usr/lib/lagan/utils/cextract
/usr/lib/lagan/utils/cmerge2.pl
/usr/lib/lagan/utils/contigorder
/usr/lib/lagan/utils/cstat
/usr/lib/lagan/utils/dotplot
/usr/lib/lagan/utils/draft.pl
/usr/lib/lagan/utils/fa2xfa
/usr/lib/lagan/utils/getbounds
/usr/lib/lagan/utils/getcontigpos
/usr/lib/lagan/utils/getlength
There is 25 files more in these RPM.

 
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