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glimmer rpm build for : Fedora 16. For other distributions click glimmer.

Name : glimmer
Version : 3.02 Vendor : Fedora Project
Release : 7.fc15 Date : 2011-02-09 04:30:53
Group : Applications/Engineering Source RPM : glimmer-3.02-7.fc15.src.rpm
Size : 12.00 MB
Packager : Fedora Project
Summary : System for finding genes in microbial DNA
Description :
Glimmer is a system for finding genes in microbial DNA, especially the genomes
of bacteria, archaea, and viruses. Glimmer (Gene Locator and Interpolated
Markov ModelER) uses interpolated Markov models (IMMs) to identify the coding
regions and distinguish them from noncoding DNA.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/16/Everything/x86_64/os/Packages

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  glimmer-3.02-7.fc15.x86_64.rpm
     

Provides :
glimmer
glimmer(x86-64)

Requires :
libc.so.6()(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
elph
/bin/awk
rtld(GNU_HASH)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6()(64bit)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
/bin/csh
rpmlib(FileDigests) <= 4.6.0-1
libm.so.6(GLIBC_2.2.5)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
rpmlib(CompressedFileNames) <= 3.0.4-1
libc.so.6(GLIBC_2.4)(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libm.so.6()(64bit)
rpmlib(PayloadIsXz) <= 5.2-1
libgcc_s.so.1()(64bit)


Content of RPM :
/usr/bin/g3-from-scratch.csh
/usr/bin/g3-from-training.csh
/usr/bin/g3-iterated.csh
/usr/bin/glimmer3
/usr/libexec/glimmer3
/usr/libexec/glimmer3/anomaly
/usr/libexec/glimmer3/build-fixed
/usr/libexec/glimmer3/build-icm
/usr/libexec/glimmer3/entropy-profile
/usr/libexec/glimmer3/entropy-score
/usr/libexec/glimmer3/extract
/usr/libexec/glimmer3/glimmer3
/usr/libexec/glimmer3/long-orfs
/usr/libexec/glimmer3/multi-extract
/usr/libexec/glimmer3/score-fixed
/usr/libexec/glimmer3/start-codon-distrib
/usr/libexec/glimmer3/uncovered
/usr/libexec/glimmer3/window-acgt
/usr/share/doc/glimmer-3.02
/usr/share/doc/glimmer-3.02/LICENSE
/usr/share/doc/glimmer-3.02/glim302notes.pdf
/usr/share/doc/glimmer-3.02/sample-run
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.detail
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.icm
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.longorfs
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.predict
/usr/share/doc/glimmer-3.02/sample-run/from-scratch.train
/usr/share/doc/glimmer-3.02/sample-run/from-training.detail
/usr/share/doc/glimmer-3.02/sample-run/from-training.icm
/usr/share/doc/glimmer-3.02/sample-run/from-training.motif
There is 21 files more in these RPM.

 
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