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bowtie rpm build for : Fedora 17. For other distributions click bowtie.

Name : bowtie
Version : 0.12.7 Vendor : Fedora Project
Release : 4.fc17 Date : 2012-02-28 19:15:31
Group : Applications/Engineering Source RPM : bowtie-0.12.7-4.fc17.src.rpm
Size : 12.89 MB
Packager : Fedora Project
Summary : An ultrafast, memory-efficient short read aligner
Description :

Bowtie, an ultrafast, memory-efficient short read aligner for short
DNA sequences (reads) from next-gen sequencers. Please cite: Langmead
B, et al. Ultrafast and memory-efficient alignment of short DNA
sequences to the human genome. Genome Biol 10:R25.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/17/Everything/x86_64/os/Packages/b

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  bowtie-0.12.7-4.fc17.x86_64.rpm
     

Provides :
bowtie
bowtie(x86-64)

Requires :
perl(Getopt::Long)
perl(FindBin)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.14)(64bit)
/bin/sh
rtld(GNU_HASH)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6()(64bit)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libpthread.so.0(GLIBC_2.2.5)(64bit)
/usr/bin/perl
libpthread.so.0()(64bit)
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(CompressedFileNames) <= 3.0.4-1
libm.so.6(GLIBC_2.2.5)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
perl(List::Util)
perl(warnings)
libc.so.6(GLIBC_2.4)(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libm.so.6()(64bit)
rpmlib(PayloadIsXz) <= 5.2-1
libgcc_s.so.1()(64bit)
perl(strict)


Content of RPM :
/usr/bin/bowtie
/usr/bin/bowtie-build
/usr/bin/bowtie-inspect
/usr/share/bowtie
/usr/share/bowtie/genomes
/usr/share/bowtie/genomes/NC_008253.fna
/usr/share/bowtie/indexes
/usr/share/bowtie/indexes/e_coli.1.ebwt
/usr/share/bowtie/indexes/e_coli.2.ebwt
/usr/share/bowtie/indexes/e_coli.3.ebwt
/usr/share/bowtie/indexes/e_coli.4.ebwt
/usr/share/bowtie/indexes/e_coli.README
/usr/share/bowtie/indexes/e_coli.rev.1.ebwt
/usr/share/bowtie/indexes/e_coli.rev.2.ebwt
/usr/share/bowtie/reads
/usr/share/bowtie/reads/e_coli_1000.fa
/usr/share/bowtie/reads/e_coli_1000.fq
/usr/share/bowtie/reads/e_coli_1000.raw
/usr/share/bowtie/reads/e_coli_10000snp.fa
/usr/share/bowtie/reads/e_coli_10000snp.fq
/usr/share/bowtie/reads/e_coli_1000_1.fa
/usr/share/bowtie/reads/e_coli_1000_1.fq
/usr/share/bowtie/reads/e_coli_1000_2.fa
/usr/share/bowtie/reads/e_coli_1000_2.fq
/usr/share/bowtie/scripts
/usr/share/bowtie/scripts/best_verify.pl
/usr/share/bowtie/scripts/bs_mapability.pl
/usr/share/bowtie/scripts/build_test.sh
/usr/share/bowtie/scripts/colorize_fasta.pl
/usr/share/bowtie/scripts/colorize_fastq.pl
There is 41 files more in these RPM.

 
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