SEARCH
NEW RPMS
DIRECTORIES
ABOUT
FAQ
VARIOUS
BLOG

 
 

mmseq rpm build for : Fedora 18. For other distributions click mmseq.

Name : mmseq
Version : 0.9.18 Vendor : Fedora Project
Release : 4.fc18 Date : 2012-08-12 23:27:57
Group : Applications/Engineering Source RPM : mmseq-0.9.18-4.fc18.src.rpm
Size : 0.35 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/18/Everything/i386/os/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-0.9.18-4.fc18.i686.rpm
     Search for other platforms
mmseq-0.9.18-4.fc18.sparc.rpm
mmseq-0.9.18-4.fc18.alpha.rpm
mmseq-0.9.18-4.fc18.ppc.rpm
mmseq-0.9.18-4.fc18.ia64.rpm
mmseq-0.9.18-4.fc18.s390.rpm

Provides :
mmseq
mmseq(x86-32)

Requires :
ruby
libstdc++.so.6(GLIBCXX_3.4)
libpthread.so.0
libgomp.so.1(OMP_1.0)
/usr/bin/env
rtld(GNU_HASH)
libgsl.so.0
libm.so.6
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.9)
libc.so.6(GLIBC_2.4)
libgcc_s.so.1
libc.so.6(GLIBC_2.1.3)
libgomp.so.1(GOMP_1.0)
rpmlib(PayloadIsXz) <= 5.2-1
libstdc++.so.6(GLIBCXX_3.4.5)
libboost_regex.so.1.50.0
libc.so.6(GLIBC_2.0)
libpthread.so.0(GLIBC_2.0)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libgomp.so.1
libc.so.6(GLIBC_2.3)
libm.so.6(GLIBC_2.0)
libgslcblas.so.0
libbam.so.1
samtools
rpmlib(FileDigests) <= 4.6.0-1
libstdc++.so.6
rpmlib(CompressedFileNames) <= 3.0.4-1
libc.so.6(GLIBC_2.1)
perl
libstdc++.so.6(GLIBCXX_3.4.11)
libgcc_s.so.1(GCC_3.0)
/bin/bash
libstdc++.so.6(CXXABI_1.3)
libc.so.6
perl(strict)
libc.so.6(GLIBC_2.3.4)


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/mmseq
/usr/bin/routeB.sh
/usr/bin/testregexp.rb
/usr/share/doc/mmseq-0.9.18
/usr/share/doc/mmseq-0.9.18/AUTHORS
/usr/share/doc/mmseq-0.9.18/COPYING

 
ICM