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samtools rpm build for : Fedora 12. For other distributions click samtools.

Name : samtools
Version : 0.1.8 Vendor : Fedora Project
Release : 1.fc12 Date : 2010-08-17 12:28:24
Group : Applications/Engineering Source RPM : samtools-0.1.8-1.fc12.src.rpm
Size : 0.66 MB
Packager : Fedora Project
Summary : Tools for nucleotide sequence alignments in the SAM format
Description :
SAM (Sequence Alignment/Map) is a flexible generic format for storing
nucleotide sequence alignment. SAM tools provide efficient utilities on
manipulating alignments in the SAM format.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/updates/12/x86_64

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  samtools-0.1.8-1.fc12.x86_64.rpm
     

Provides :
samtools
samtools(x86-64)

Requires :
perl(Getopt::Long)
libc.so.6()(64bit)
perl(Getopt::Std)
perl(File::Spec)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
/usr/bin/env
rtld(GNU_HASH)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libtinfo.so.5()(64bit)
/usr/bin/perl
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(CompressedFileNames) <= 3.0.4-1
libm.so.6(GLIBC_2.2.5)(64bit)
perl(List::Util)
libncurses.so.5()(64bit)
perl(warnings)
libc.so.6(GLIBC_2.7)(64bit)
perl(constant)
libc.so.6(GLIBC_2.4)(64bit)
perl(Carp)
libm.so.6()(64bit)
libc.so.6(GLIBC_2.3)(64bit)
/usr/bin/python
rpmlib(PayloadIsXz) <= 5.2-1
perl(Data::Dumper)
perl(strict)
libz.so.1()(64bit)


Content of RPM :
/usr/bin/blast2sam.pl
/usr/bin/bowtie2sam.pl
/usr/bin/export2sam.pl
/usr/bin/interpolate_sam.pl
/usr/bin/maq2sam-long
/usr/bin/maq2sam-short
/usr/bin/md5fa
/usr/bin/md5sum-lite
/usr/bin/novo2sam.pl
/usr/bin/psl2sam.pl
/usr/bin/razip
/usr/bin/sam2vcf.pl
/usr/bin/samtools
/usr/bin/samtools.pl
/usr/bin/soap2sam.pl
/usr/bin/varfilter.py
/usr/bin/wgsim
/usr/bin/wgsim_eval.pl
/usr/bin/zoom2sam.pl
/usr/share/doc/samtools-0.1.8
/usr/share/doc/samtools-0.1.8/AUTHORS
/usr/share/doc/samtools-0.1.8/COPYING
/usr/share/doc/samtools-0.1.8/ChangeLog
/usr/share/doc/samtools-0.1.8/INSTALL
/usr/share/doc/samtools-0.1.8/NEWS
/usr/share/doc/samtools-0.1.8/examples
/usr/share/doc/samtools-0.1.8/examples/00README.txt
/usr/share/doc/samtools-0.1.8/examples/Makefile
/usr/share/doc/samtools-0.1.8/examples/bam2bed.c
/usr/share/doc/samtools-0.1.8/examples/calDepth.c
There is 6 files more in these RPM.

 
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