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BEDTools rpm build for : Fedora 16. For other distributions click BEDTools.

Name : BEDTools
Version : 2.15.0 Vendor : Fedora Project
Release : 1.fc16 Date : 2012-01-04 18:38:20
Group : Applications/Engineering Source RPM : BEDTools-2.15.0-1.fc16.src.rpm
Size : 3.38 MB
Packager : Fedora Project
Summary : A flexible suite of utilities for comparing genomic features
Description :

The BEDTools utilities allow one to address common genomics tasks such
as finding feature overlaps and computing coverage. The utilities are
largely based on four widely-used file formats: BED, GFF/GTF, VCF, and
SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that
answer complicated research questions by \"streaming\" several BEDTools
together.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/updates/16/i386

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  BEDTools-2.15.0-1.fc16.i686.rpm
     Search for other platforms
BEDTools-2.15.0-1.fc16.sparc.rpm
BEDTools-2.15.0-1.fc16.alpha.rpm
BEDTools-2.15.0-1.fc16.ppc.rpm
BEDTools-2.15.0-1.fc16.ia64.rpm
BEDTools-2.15.0-1.fc16.s390.rpm

Provides :
BEDTools
BEDTools(x86-32)

Requires :
libstdc++.so.6(GLIBCXX_3.4)
libc.so.6(GLIBC_2.0)
/bin/sh
rtld(GNU_HASH)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libm.so.6(GLIBC_2.0)
libm.so.6
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(CompressedFileNames) <= 3.0.4-1
libstdc++.so.6(GLIBCXX_3.4.9)
libc.so.6(GLIBC_2.4)
libstdc++.so.6
libc.so.6(GLIBC_2.1)
libgcc_s.so.1
libz.so.1
libc.so.6(GLIBC_2.1.3)
libstdc++.so.6(GLIBCXX_3.4.11)
rpmlib(PayloadIsXz) <= 5.2-1
libc.so.6(GLIBC_2.15)
libgcc_s.so.1(GCC_3.0)
libstdc++.so.6(CXXABI_1.3)
libc.so.6
libc.so.6(GLIBC_2.3.4)


Content of RPM :
/usr/bin/annotateBed
/usr/bin/bamToBed
/usr/bin/bed12ToBed6
/usr/bin/bedToBam
/usr/bin/bedToIgv
/usr/bin/bedpeToBam
/usr/bin/bedtools
/usr/bin/closestBed
/usr/bin/clusterBed
/usr/bin/complementBed
/usr/bin/coverageBed
/usr/bin/fastaFromBed
/usr/bin/flankBed
/usr/bin/genomeCoverageBed
/usr/bin/getOverlap
/usr/bin/groupBy
/usr/bin/intersectBed
/usr/bin/linksBed
/usr/bin/maskFastaFromBed
/usr/bin/mergeBed
/usr/bin/multiBamCov
/usr/bin/multiIntersectBed
/usr/bin/nucBed
/usr/bin/pairToBed
/usr/bin/pairToPair
/usr/bin/shuffleBed
/usr/bin/slopBed
/usr/bin/sortBed
/usr/bin/subtractBed
/usr/bin/tagBam
There is 16 files more in these RPM.

 
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