SEARCH
NEW RPMS
DIRECTORIES
ABOUT
FAQ
VARIOUS
BLOG

 
 

mmseq rpm build for : Fedora 16. For other distributions click mmseq.

Name : mmseq
Version : 0.9.18 Vendor : Fedora Project
Release : 1.fc16 Date : 2012-01-11 16:21:24
Group : Applications/Engineering Source RPM : mmseq-0.9.18-1.fc16.src.rpm
Size : 0.31 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/updates/16/x86_64

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-0.9.18-1.fc16.x86_64.rpm
     

Provides :
mmseq
mmseq(x86-64)

Requires :
ruby
libc.so.6()(64bit)
libgomp.so.1(GOMP_1.0)(64bit)
/usr/bin/env
rtld(GNU_HASH)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libboost_regex.so.1.47.0()(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
rpmlib(PayloadIsXz) <= 5.2-1
libbam.so.1()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libstdc++.so.6()(64bit)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libpthread.so.0(GLIBC_2.2.5)(64bit)
libgsl.so.0()(64bit)
libpthread.so.0()(64bit)
libgomp.so.1(OMP_1.0)(64bit)
samtools
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
libc.so.6(GLIBC_2.4)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
perl
libm.so.6()(64bit)
libgslcblas.so.0()(64bit)
libgomp.so.1()(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libgcc_s.so.1()(64bit)
/bin/bash
perl(strict)


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/mmseq
/usr/bin/routeB.sh
/usr/bin/testregexp.rb
/usr/share/doc/mmseq-0.9.18
/usr/share/doc/mmseq-0.9.18/AUTHORS
/usr/share/doc/mmseq-0.9.18/COPYING

  
ICM