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samtools rpm build for : Fedora 18. For other distributions click samtools.

Name : samtools
Version : 0.1.19 Vendor : Fedora Project
Release : 1.fc18 Date : 2013-04-21 00:32:34
Group : Applications/Engineering Source RPM : samtools-0.1.19-1.fc18.src.rpm
Size : 1.00 MB
Packager : Fedora Project
Summary : Tools for nucleotide sequence alignments in the SAM format
Description :
SAM (Sequence Alignment/Map) is a flexible generic format for storing
nucleotide sequence alignment.
SAM Tools provide various utilities for manipulating alignments in the
SAM format, including sorting, merging, indexing and generating
alignments in a per-position format.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/updates/18/x86_64

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  samtools-0.1.19-1.fc18.x86_64.rpm
     

Provides :
samtools
samtools(x86-64)

Requires :
perl(Getopt::Long)
libc.so.6()(64bit)
perl(File::Spec)
/usr/bin/env
rtld(GNU_HASH)
libz.so.1(ZLIB_1.2.3.3)(64bit)
/usr/bin/perl
libm.so.6(GLIBC_2.2.5)(64bit)
libz.so.1(ZLIB_1.2.2)(64bit)
libncurses.so.5()(64bit)
perl(warnings)
perl(constant)
perl(Carp)
libpthread.so.0(GLIBC_2.3.2)(64bit)
/usr/bin/python
rpmlib(PayloadIsXz) <= 5.2-1
perl(Data::Dumper)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
perl(Getopt::Std)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libtinfo.so.5()(64bit)
libpthread.so.0(GLIBC_2.2.5)(64bit)
libpthread.so.0()(64bit)
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(CompressedFileNames) <= 3.0.4-1
perl(List::Util)
libc.so.6(GLIBC_2.7)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libz.so.1(ZLIB_1.2.0)(64bit)
libc.so.6(GLIBC_2.15)(64bit)
libm.so.6()(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libz.so.1()(64bit)
perl(strict)


Content of RPM :
/usr/bin/bcftools
/usr/bin/blast2sam.pl
/usr/bin/bowtie2sam.pl
/usr/bin/export2sam.pl
/usr/bin/interpolate_sam.pl
/usr/bin/maq2sam-long
/usr/bin/maq2sam-short
/usr/bin/md5fa
/usr/bin/md5sum-lite
/usr/bin/novo2sam.pl
/usr/bin/psl2sam.pl
/usr/bin/razip
/usr/bin/sam2vcf.pl
/usr/bin/samtools
/usr/bin/samtools.pl
/usr/bin/soap2sam.pl
/usr/bin/varfilter.py
/usr/bin/vcfutils.pl
/usr/bin/wgsim
/usr/bin/wgsim_eval.pl
/usr/bin/zoom2sam.pl
/usr/share/doc/samtools-0.1.19
/usr/share/doc/samtools-0.1.19/AUTHORS
/usr/share/doc/samtools-0.1.19/COPYING
/usr/share/doc/samtools-0.1.19/ChangeLog.old
/usr/share/doc/samtools-0.1.19/INSTALL
/usr/share/doc/samtools-0.1.19/NEWS
/usr/share/doc/samtools-0.1.19/README.bcftools
/usr/share/doc/samtools-0.1.19/bcf.tex
/usr/share/doc/samtools-0.1.19/examples
There is 10 files more in these RPM.

  
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