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mmseq rpm build for : Fedora 23. For other distributions click mmseq.

Name : mmseq
Version : 1.0.8a Vendor : Fedora Project
Release : 12.fc23 Date : 2016-02-25 17:09:46
Group : Applications/Engineering Source RPM : mmseq-1.0.8a-12.fc23.src.rpm
Size : 1.72 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/updates/23/i386/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.8a-12.fc23.i686.rpm
     Search for other platforms
mmseq-1.0.8a-12.fc23.sparc.rpm
mmseq-1.0.8a-12.fc23.alpha.rpm
mmseq-1.0.8a-12.fc23.ppc.rpm
mmseq-1.0.8a-12.fc23.ia64.rpm
mmseq-1.0.8a-12.fc23.s390.rpm

Provides :
mmseq
mmseq(x86-32)

Requires :
/bin/bash
/bin/sh
/usr/bin/env
libarmadillo.so.6
libbam.so.1
libblas.so.3
libboost_iostreams.so.1.58.0
libboost_regex.so.1.58.0
libc.so.6
libc.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.1)
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.2)
libc.so.6(GLIBC_2.3)
libc.so.6(GLIBC_2.3.4)
libc.so.6(GLIBC_2.4)
libgcc_s.so.1
libgcc_s.so.1(GCC_3.0)
libgcc_s.so.1(GLIBC_2.0)
libgfortran.so.3
libgomp.so.1
libgomp.so.1(GOMP_1.0)
libgomp.so.1(GOMP_4.0)
libgomp.so.1(OMP_1.0)
libgsl.so.0
libgslcblas.so.0
liblapack.so.3
libm.so.6
libm.so.6(GLIBC_2.0)
libm.so.6(GLIBC_2.1)
libstdc++.so.6
libstdc++.so.6(CXXABI_1.3)
libstdc++.so.6(GLIBCXX_3.4)
libstdc++.so.6(GLIBCXX_3.4.11)
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.20)
libstdc++.so.6(GLIBCXX_3.4.21)
libstdc++.so.6(GLIBCXX_3.4.9)
perl
perl(strict)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/share/doc/mmseq
/usr/share/doc/mmseq/COPYING
/usr/share/doc/mmseq/README.md
/usr/share/doc/mmseq/doc
/usr/share/doc/mmseq/doc/332.mat
/usr/share/doc/mmseq/doc/countsDE.md
/usr/share/doc/mmseq/doc/dod2.mat
/usr/share/doc/mmseq/doc/mmseq-collage.png

 
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