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R-vsn rpm build for : Mandrake Other. For other distributions click R-vsn.

Name : R-vsn
Version : 3.22.0 Vendor : Mandriva
Release : 1 Date : 2012-02-18 21:19:01
Group : Sciences/Mathematics Source RPM : R-vsn-3.22.0-1.src.rpm
Size : 2.14 MB
Packager : Paulo Andrade < pcpa_mandriva_com_br>
Summary : Variance stabilization and calibration for microarray data
Description :
The package implements a method for normalising microarray intensities,
both between colours within array, and between arrays. The method uses a
robust variant of the maximum-likelihood estimator for the stochastic
model of microarray data described in the references (see vignette). The
model incorporates data calibration (a.k.a. normalization), a model for
the dependence of the variance on the mean intensity, and a variance
stabilizing data transformation. Differences between transformed
intensities are analogous to \"normalized log-ratios\". However, in contrast
to the latter, their variance is independent of the mean, and they are
usually more sensitive and specific in detecting differential

RPM found in directory: /vol/rzm6/linux-mandriva/devel/cooker/i586/media/contrib/release

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  R-vsn-3.22.0-1-mdv2012.0.i586.rpm
     Search for other platforms
R-vsn-3.22.0-1-mdv2012.0.sparc.rpm
R-vsn-3.22.0-1-mdv2012.0.alpha.rpm
R-vsn-3.22.0-1-mdv2012.0.ppc.rpm
R-vsn-3.22.0-1-mdv2012.0.ia64.rpm
R-vsn-3.22.0-1-mdv2012.0.s390.rpm

Provides :
vsn.so
R-vsn

Requires :
R-Biobase
R-methods
R-affy
R-limma
R-lattice
R-affydata
R-hgu95av2cdf
libR.so
libc.so.6
libc.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.4)
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib/R/library/vsn
/usr/lib/R/library/vsn/CITATION
/usr/lib/R/library/vsn/DESCRIPTION
/usr/lib/R/library/vsn/INDEX
/usr/lib/R/library/vsn/Meta
/usr/lib/R/library/vsn/Meta/Rd.rds
/usr/lib/R/library/vsn/Meta/data.rds
/usr/lib/R/library/vsn/Meta/hsearch.rds
/usr/lib/R/library/vsn/Meta/links.rds
/usr/lib/R/library/vsn/Meta/nsInfo.rds
/usr/lib/R/library/vsn/Meta/package.rds
/usr/lib/R/library/vsn/Meta/vignette.rds
/usr/lib/R/library/vsn/NAMESPACE
/usr/lib/R/library/vsn/R
/usr/lib/R/library/vsn/R/vsn
/usr/lib/R/library/vsn/R/vsn.rdb
/usr/lib/R/library/vsn/R/vsn.rdx
/usr/lib/R/library/vsn/data
/usr/lib/R/library/vsn/data/kidney.RData
/usr/lib/R/library/vsn/data/lymphoma.RData
/usr/lib/R/library/vsn/doc
/usr/lib/R/library/vsn/doc/Makefile
/usr/lib/R/library/vsn/doc/convergence2.Rnw
/usr/lib/R/library/vsn/doc/convergence2.pdf
/usr/lib/R/library/vsn/doc/index.html
/usr/lib/R/library/vsn/doc/likelihoodcomputations.Rnw
/usr/lib/R/library/vsn/doc/likelihoodcomputations.pdf
/usr/lib/R/library/vsn/doc/vsn.R
/usr/lib/R/library/vsn/doc/vsn.Rnw
/usr/lib/R/library/vsn/doc/vsn.pdf
There is 38 files more in these RPM.

 
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