SEARCH
NEW RPMS
DIRECTORIES
ABOUT
FAQ
VARIOUS
BLOG

 
 

wise rpm build for : Mandriva 2009. For other distributions click wise.

Name : wise
Version : 2.2.0 Vendor : Mandriva
Release : 5mdv2009.0 Date : 2008-07-30 21:55:52
Group : Sciences/Biology Source RPM : wise-2.2.0-5mdv2009.0.src.rpm
Size : 7.57 MB
Packager : Thierry Vignaud < tvignaud_mandriva_com>
Summary : Comparisons of DNA and protein sequences
Description :
Wise2 is a package focused on comparisons of biopolymers, commonly DNA and
protein sequence. Wise2\'s particular forte is the comparison of DNA sequence
at the level of its protein translation. This comparison allows the simulta-
neous prediction of say gene structure with homology based alignment.

The Wise2 package was principally written by Ewan Birney, who wrote the main
genewise and estwise programs. The protein comparison database search program
was written by Richard Copley using the underlying Wise2 libraries.
Wise2 also uses code from Sean Eddy for reading HMMs and
for Extreme value distribution fitting.

RPM found in directory: /vol/rzm6/linux-mandriva/official/2009.0/i586/media/contrib/release

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  wise-2.2.0-5mdv2009.0.i586.rpm
ftp.icm.edu.pl  wise-2.2.0-5mdv2009.0.i586.rpm
     Search for other platforms
wise-2.2.0-5mdv2009.0.sparc.rpm
wise-2.2.0-5mdv2009.0.alpha.rpm
wise-2.2.0-5mdv2009.0.ppc.rpm
wise-2.2.0-5mdv2009.0.ia64.rpm
wise-2.2.0-5mdv2009.0.s390.rpm

Provides :
wise

Requires :
libc.so.6(GLIBC_2.4)
rpmlib(CompressedFileNames) <= 3.0.4-1
libc.so.6(GLIBC_2.1)
rpmlib(PayloadIsLzma) <= 4.4.6-1
libc.so.6(GLIBC_2.0)
rtld(GNU_HASH)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libc.so.6(GLIBC_2.7)
libm.so.6(GLIBC_2.0)
libc.so.6
libc.so.6(GLIBC_2.3)
libm.so.6
libc.so.6(GLIBC_2.3.4)


Content of RPM :
/etc/profile.d/wise.csh
/etc/profile.d/wise.sh
/usr/bin/dba
/usr/bin/dnal
/usr/bin/estwise
/usr/bin/estwisedb
/usr/bin/genewise
/usr/bin/genewisedb
/usr/bin/genomewise
/usr/bin/psw
/usr/bin/pswdb
/usr/share/doc/wise
/usr/share/doc/wise/LICENSE
/usr/share/doc/wise/README
/usr/share/doc/wise/docs
/usr/share/doc/wise/docs/README
/usr/share/doc/wise/docs/apiend.tex
/usr/share/doc/wise/docs/appendix.tex
/usr/share/doc/wise/docs/dynamite.tex
/usr/share/doc/wise/docs/genewise21.eps
/usr/share/doc/wise/docs/genewise6.eps
/usr/share/doc/wise/docs/gettex.pl
/usr/share/doc/wise/docs/makefile
/usr/share/doc/wise/docs/wise2.tex
/usr/share/doc/wise/docs/wise2api.tex
/usr/share/doc/wise/docs/wise3arch.tex
/usr/share/wise
/usr/share/wise/BLOSUM30.bla
/usr/share/wise/BLOSUM45.bla
/usr/share/wise/BLOSUM62.bla
There is 23 files more in these RPM.

 
ICM