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mmseq rpm build for : Fedora 27. For other distributions click mmseq.

Name : mmseq
Version : 1.0.8a Vendor : Fedora Project
Release : 27.fc27 Date : 2018-08-27 20:24:34
Group : Applications/Engineering Source RPM : mmseq-1.0.8a-27.fc27.src.rpm
Size : 1.68 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora-secondary/updates/27/i386/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.8a-27.fc27.i686.rpm
     Search for other platforms
mmseq-1.0.8a-27.fc27.sparc.rpm
mmseq-1.0.8a-27.fc27.alpha.rpm
mmseq-1.0.8a-27.fc27.ppc.rpm
mmseq-1.0.8a-27.fc27.ia64.rpm
mmseq-1.0.8a-27.fc27.s390.rpm

Provides :
mmseq
mmseq(x86-32)

Requires :
/bin/bash
/bin/sh
/usr/bin/env
libarmadillo.so.9
libbam.so.1
libblas.so.3
libboost_iostreams.so.1.64.0
libboost_regex.so.1.64.0
libc.so.6
libc.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.1)
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.2)
libc.so.6(GLIBC_2.3)
libc.so.6(GLIBC_2.3.4)
libc.so.6(GLIBC_2.4)
libgcc_s.so.1
libgcc_s.so.1(GCC_3.0)
libgfortran.so.4
libgomp.so.1
libgomp.so.1(GOMP_1.0)
libgomp.so.1(GOMP_4.0)
libgomp.so.1(OMP_1.0)
libgsl.so.23
libgslcblas.so.0
liblapack.so.3
libm.so.6
libm.so.6(GLIBC_2.0)
libm.so.6(GLIBC_2.1)
libstdc++.so.6
libstdc++.so.6(CXXABI_1.3)
libstdc++.so.6(CXXABI_1.3.8)
libstdc++.so.6(CXXABI_1.3.9)
libstdc++.so.6(GLIBCXX_3.4)
libstdc++.so.6(GLIBCXX_3.4.11)
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.20)
libstdc++.so.6(GLIBCXX_3.4.21)
libstdc++.so.6(GLIBCXX_3.4.9)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/2c
/usr/lib/.build-id/2c/1853fb928c15b64c5d548cb25faa05dd10ee8c
/usr/lib/.build-id/43
/usr/lib/.build-id/43/510a07171c82b48d726b63f3b35922f72e1080
/usr/lib/.build-id/53
/usr/lib/.build-id/53/85f2737b708cd78206ab1985bed053771b990f
/usr/lib/.build-id/a8
/usr/lib/.build-id/a8/b9ee497b959e39e58ef8edf4dd82d22fc994b6
/usr/lib/.build-id/ae
/usr/lib/.build-id/ae/c1cc6143118d9f3283ddedcf0d5f070ea665c1
/usr/lib/.build-id/ba
/usr/lib/.build-id/ba/0568c337315afb43ebbd2ae63ce156c7c0b79f
/usr/lib/.build-id/c1
/usr/lib/.build-id/c1/91358f8587f2ca8fa2101208a6dade6ec75cde
There is 10 files more in these RPM.

 
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