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amos rpm build for : CentOS 6. For other distributions click amos.

Name : amos
Version : 3.1.0 Vendor : obs://build_opensuse_org/home:halocaridina
Release : 2.6 Date : 2018-07-04 04:15:07
Group : Other Source RPM : amos-3.1.0-2.6.src.rpm
Size : 260.39 MB
Packager : (none)
Summary : AMOS is a Modular, Open-Source whole genome assembler
Description :
The AMOS consortium is committed to the development of open-source whole genome assembly
software. The project acronym (AMOS) represents our primary goal -- to produce AMOS is a
Modular, Open-Source whole genome assembler.

The various functions are facilitated by different modules unified by a common development
framework. For example, see HawkEye, Minimus, the Celera Assembler (CABOG), AMOS Validate
and others.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/home:/halocaridina/CentOS_CentOS-6/i686

Content of RPM  Changelog  Provides Requires

Hmm ... It's impossible ;-) This RPM doesn't exist on any FTP server

Provides :
perl(AMOS::AmosFoundation)
perl(AMOS::AmosLib)
perl(AMOS::DotLib)
perl(AMOS::ParseFasta)
perl(AMOS::xfig)
perl(TIGR::AsmLib)
perl(TIGR::FASTAgrammar)
perl(TIGR::FASTAiterator)
perl(TIGR::FASTAreader)
perl(TIGR::FASTArecord)
perl(TIGR::FASTAwriter)
perl(TIGR::Foundation)
amos
amos(x86-32)

Requires :
perl(Getopt::Long)
perl(DBI)
perl(POSIX)
perl(File::Spec)
perl(Exporter)
redhat-rpm-config
rtld(GNU_HASH)
/usr/bin/runAmos
perl(Sys::Hostname)
libm.so.6
perl(warnings)
perl(IO::Handle)
perl(XML::Parser)
libgcc_s.so.1
libexpat.so.1
libz.so.1
libc.so.6(GLIBC_2.1.3)
/usr/bin/python
perl(TIGR::Foundation)
libXi
libstdc++.so.6(GLIBCXX_3.4.5)
perl(Statistics::Descriptive)
BLAT
perl(Fcntl)
libstdc++.so.6(GLIBCXX_3.4.6)
libstdc++.so.6(CXXABI_1.3.1)
perl(lib)
perl(FileHandle)
/bin/sh
libgcc_s.so.1(GCC_4.0.0)
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(CompressedFileNames) <= 3.0.4-1
libstdc++.so.6
rpmlib(PartialHardlinkSets) <= 4.0.4-1
perl(TIGR::FASTAgrammar)
boost
libstdc++.so.6(GLIBCXX_3.4.11)
expat
MUMmer
libc.so.6
libc.so.6(GLIBC_2.3.4)
libstdc++.so.6(GLIBCXX_3.4)
perl(TIGR::AsmLib)
perl(vars)
/usr/bin/perl
libc.so.6(GLIBC_2.4)
libstdc++.so.6(GLIBCXX_3.4.9)
perl(TIGR::FASTAiterator)
perl(AMOS::AmosLib)
rpmlib(PayloadIsXz) <= 5.2-1
expat-devel
libc.so.6(GLIBC_2.7)
perl(AMOS::DotLib)
libXmu
libc.so.6(GLIBC_2.0)
perl(AMOS::ParseFasta)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
qt
libm.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.3)
perl(File::Basename)
perl(Cwd)
perl(TIGR::FASTArecord)
rpmlib(VersionedDependencies) <= 3.0.3-1
libc.so.6(GLIBC_2.1)
perl
perl(TIGR::FASTAreader)
libm.so.6(GLIBC_2.1)
perl(AMOS::AmosFoundation)
libgcc_s.so.1(GCC_3.0)
python
perl(IO::File)
libstdc++.so.6(CXXABI_1.3)
perl(strict)


Content of RPM :
/usr/bin/AMOScmp
/usr/bin/AMOScmp-shortReads
/usr/bin/AMOScmp-shortReads-alignmentTrimmed
/usr/bin/Bundler
/usr/bin/Chainer
/usr/bin/FRCurve
/usr/bin/FilterEdgesByCluster
/usr/bin/Joiner
/usr/bin/Linearize
/usr/bin/MarkRepeats
/usr/bin/Minimo
/usr/bin/OrientContigs
/usr/bin/OutputMotifs
/usr/bin/OutputResults
/usr/bin/OutputScaffolds
/usr/bin/ace2contig
/usr/bin/agp2amos
/usr/bin/amos2ace
/usr/bin/amos2frg
/usr/bin/amos2mates
/usr/bin/amos2sq
/usr/bin/amosvalidate
/usr/bin/analyze-read-depth
/usr/bin/analyzeSNPs
/usr/bin/arachne2ctg
/usr/bin/arachne2scaff
/usr/bin/arrive
/usr/bin/arrive2
/usr/bin/asmQC
/usr/bin/asmQC2
There is 690 files more in these RPM.

 
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