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Gassst rpm build for : CentOS 6. For other distributions click Gassst.

Name : Gassst
Version : 1.28 Vendor : obs://build_opensuse_org/home:halocaridina
Release : 2.4 Date : 2018-07-04 04:20:27
Group : Other Source RPM : Gassst-1.28-2.4.src.rpm
Size : 0.14 MB
Packager : (none)
Summary : Global Alignment Short Sequence Search Tool
Description :
GASSST finds global alignments of short DNA sequences against large DNA banks and its strong point is its ability to perform
fast gapped alignments. It works well for both short and longer reads. It currently has been tested for reads up to 500bp.

For alignments with 90 % similarity minimum:

Gassst -d bank.fasta -i query.fasta -o results -p 90

Then call \"gassst_to_sam\" if you want to convert output to SAM format:

gassst_to_sam results results.sam

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/home:/halocaridina/CentOS_CentOS-6/x86_64

Content of RPM  Changelog  Provides Requires

Hmm ... It's impossible ;-) This RPM doesn't exist on any FTP server

Provides :
Gassst
Gassst(x86-64)

Requires :
libc.so.6()(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
rtld(GNU_HASH)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6()(64bit)
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
libpthread.so.0(GLIBC_2.2.5)(64bit)
libpthread.so.0()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libm.so.6()(64bit)
rpmlib(PayloadIsXz) <= 5.2-1
libgcc_s.so.1()(64bit)


Content of RPM :
/usr/bin/Gassst
/usr/bin/gassst_to_sam
/usr/share/doc/Gassst-1.28
/usr/share/doc/Gassst-1.28/LICENSE
/usr/share/doc/Gassst-1.28/README

 
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