| Name : reaper
| |
| Version : 13.274
| Vendor : obs://build_opensuse_org/home:halocaridina
|
| Release : 1.4
| Date : 2018-07-04 04:20:57
|
| Group : Other
| Source RPM : reaper-13.274-1.4.src.rpm
|
| Size : 0.36 MB
| |
| Packager : (none)
| |
| Summary : Reaper is a program for demultiplexing, trimming and filtering short read sequencing data
|
Description :
Reaper is a fast and highly memory-efficient program written in C, able to process 60-200M reads per hour. It allows
tunable identification and stripping of adapter sequences using Smith-Waterman alignments, recognises several types of
barcode position and read layout, demultiplexes barcodes, and generates extensive summary statistics including base call
quality and tri-nucleotide complexity scores that can be used to perform quality control. Users can specify their own input
and output formats in a simple specification language. By default Reaper expects FASTQ input, that may have been compressed.
Reaper has been designed to address complex experimental designs and allow filtering based on a range of parameters within
a single iteration of the software with minimal impact on speed and memory requirements. Reaper is shipped with tally, a
program for uniquifying reads that is optimised to minimise memory usage by compressing sequences in memory.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/home:/halocaridina/CentOS_CentOS-6/x86_64 |
Hmm ... It's impossible ;-) This RPM doesn't exist on any FTP server
Provides :
reaper
reaper(x86-64)
Requires :
