| Name : wgs
| |
| Version : 7.0
| Vendor : obs://build_opensuse_org/home:halocaridina
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| Release : 9.4
| Date : 2018-07-04 04:22:02
|
| Group : Other
| Source RPM : wgs-7.0-9.4.src.rpm
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| Size : 15.87 MB
| |
| Packager : (none)
| |
| Summary : Celera Assembler is scientific software for DNA research
|
Description :
Celera Assembler is scientific software for biological research. Celera Assembler is a de novo
whole-genome shotgun (WGS) DNA sequence assembler. It reconstructs long sequences of genomic DNA
from fragmentary data produced by whole-genome shotgun sequencing. Celera Assembler has enabled
many advances in genomics, including the first whole genome shotgun sequence of a multi-cellular
organism (Myers 2000) and the first diploid sequence of an individual human (Levy 2007). Celera
Assembler was developed at Celera Genomics starting in 1999. It was released to SourceForge in 2004
as the wgs-assembler under the GNU General Public License. The pipeline revised for 454 data was named
CABOG (Miller 2008).
Celera Assembler can use any combination of reads from:
1) dideoxy (Sanger) sequencing platforms such as the Applied Biosystems 3730 DNA Analyzer and 3730xl DNA Analyzer
2) pyrosequencing platforms such as the 454 Life Sciences Genome Sequencer FLX Titanium and GS Junior.
(Reads from the discontinued Genome Sequencer FLX before Titanium reagents and Genome Sequencer 20 are supported as well.)
3) sequencing by synthesis platforms such as the Illumina HiSeq 2000, Genome Analyzer IIx and Genome Analyzer IIe.
(Reads shorter than 75bp are not supported.)
4) single-molecule sequencing platforms such as the Pacific Biosciences PacBio RS (after correction with a complementary technology using the pacBioToCA pipeline.)
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RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/home:/halocaridina/CentOS_CentOS-6/x86_64 |
Hmm ... It's impossible ;-) This RPM doesn't exist on any FTP server
Provides :
perl(TIGR::AsmLib)
perl(TIGR::Foundation)
wgs
wgs(x86-64)
Requires :
