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samtools-legacy rpm build for : openSUSE Tumbleweed. For other distributions click samtools-legacy.

Name : samtools-legacy
Version : 0.1.19 Vendor : obs://build_opensuse_org/home:so_it_team
Release : 4.3 Date : 2016-05-04 14:00:00
Group : Productivity/Scientific/Other Source RPM : samtools-legacy-0.1.19-4.3.src.rpm
Size : 1.06 MB
Packager : (none)
Summary : Tools for manipulating next-generation sequencing data
Description :
Samtools implements various utilities for post-processing alignments in the
SAM, BAM, and CRAM formats, including indexing, variant calling (in conjunction
with bcftools), and a simple alignment viewer.

This is the legacy version which does not use the HTSlib and is required by some software.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/home:/so_it_team/openSUSE_Tumbleweed/x86_64

Content of RPM  Changelog  Provides Requires

Hmm ... It's impossible ;-) This RPM doesn't exist on any FTP server

Provides :
samtools-legacy
samtools-legacy(x86-64)

Requires :
/usr/bin/env
/usr/bin/perl
libbam1 = 0.1.19-4.3
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.15)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libc.so.6(GLIBC_2.7)(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libm.so.6(GLIBC_2.23)(64bit)
libncurses.so.6()(64bit)
libncurses.so.6(NCURSEST6_5.7.20081102)(64bit)
libpthread.so.0()(64bit)
libpthread.so.0(GLIBC_2.2.5)(64bit)
libpthread.so.0(GLIBC_2.3.2)(64bit)
libtinfo.so.6()(64bit)
libtinfo.so.6(NCURSES6_TINFO_5.0.19991023)(64bit)
libtinfo.so.6(NCURSES6_TINFO_5.7.20081102)(64bit)
libz.so.1()(64bit)
libz.so.1(ZLIB_1.2.0)(64bit)
libz.so.1(ZLIB_1.2.2)(64bit)
libz.so.1(ZLIB_1.2.3.3)(64bit)
perl
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsLzma) <= 4.4.6-1


Content of RPM :
/usr/bin/bcftools
/usr/bin/blast2sam.pl
/usr/bin/bowtie2sam.pl
/usr/bin/export2sam.pl
/usr/bin/interpolate_sam.pl
/usr/bin/maq2sam-long
/usr/bin/maq2sam-short
/usr/bin/md5fa
/usr/bin/md5sum-lite
/usr/bin/novo2sam.pl
/usr/bin/psl2sam.pl
/usr/bin/razip
/usr/bin/sam2vcf.pl
/usr/bin/samtools
/usr/bin/samtools.pl
/usr/bin/soap2sam.pl
/usr/bin/varfilter.py
/usr/bin/vcfutils.pl
/usr/bin/wgsim
/usr/bin/wgsim_eval.pl
/usr/bin/zoom2sam.pl
/usr/share/doc/packages/samtools-legacy
/usr/share/doc/packages/samtools-legacy/AUTHORS
/usr/share/doc/packages/samtools-legacy/COPYING
/usr/share/doc/packages/samtools-legacy/ChangeLog.old
/usr/share/doc/packages/samtools-legacy/INSTALL
/usr/share/doc/packages/samtools-legacy/NEWS
/usr/share/doc/packages/samtools-legacy/README.bcftools
/usr/share/doc/packages/samtools-legacy/bcf.tex
/usr/share/doc/packages/samtools-legacy/examples
There is 10 files more in these RPM.

 
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