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mmseq rpm build for : Fedora 29. For other distributions click mmseq.

Name : mmseq
Version : 1.0.8a Vendor : Fedora Project
Release : 27.fc29 Date : 2018-08-27 12:29:40
Group : Applications/Engineering Source RPM : mmseq-1.0.8a-27.fc29.src.rpm
Size : 1.85 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/29/Everything/x86_64/os/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.8a-27.fc29.x86_64.rpm
     

Provides :
mmseq
mmseq(x86-64)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libarmadillo.so.9()(64bit)
libbam.so.1()(64bit)
libblas.so.3()(64bit)
libboost_iostreams.so.1.66.0()(64bit)
libboost_regex.so.1.66.0()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libgcc_s.so.1()(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libgfortran.so.5()(64bit)
libgomp.so.1()(64bit)
libgomp.so.1(GOMP_1.0)(64bit)
libgomp.so.1(GOMP_4.0)(64bit)
libgomp.so.1(OMP_1.0)(64bit)
libgsl.so.23()(64bit)
libgslcblas.so.0()(64bit)
liblapack.so.3()(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libstdc++.so.6()(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(CXXABI_1.3.8)(64bit)
libstdc++.so.6(CXXABI_1.3.9)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/07
/usr/lib/.build-id/07/a4d0ec2f4aa23469200b658c5a5c6ae756e9c1
/usr/lib/.build-id/17
/usr/lib/.build-id/17/c4616db8ae2a69ef5008f45d6146dea0843b9f
/usr/lib/.build-id/81
/usr/lib/.build-id/81/4933e28bba92000be5b82b689a0bd0cc72337e
/usr/lib/.build-id/90
/usr/lib/.build-id/90/9b48931c8a95d8c807a450b66488c4e4c61def
/usr/lib/.build-id/a2
/usr/lib/.build-id/a2/9d2a1da51343a32cfa5286148e50f6293f94a6
/usr/lib/.build-id/d1
/usr/lib/.build-id/d1/7a6f795575a1aa92ae0dca72fa4970d936e3e8
/usr/lib/.build-id/f5
/usr/lib/.build-id/f5/659e0edbfbcbe9a8ab8d542f8030a2d3508310
There is 10 files more in these RPM.

 
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