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mmseq rpm build for : Fedora 30. For other distributions click mmseq.

Name : mmseq
Version : 1.0.8a Vendor : Fedora Project
Release : 29.fc30 Date : 2019-02-02 00:01:41
Group : Unspecified Source RPM : mmseq-1.0.8a-29.fc30.src.rpm
Size : 2.43 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/30/Everything/x86_64/os/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.8a-29.fc30.x86_64.rpm
     

Provides :
mmseq
mmseq(x86-64)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libarmadillo.so.9()(64bit)
libbam.so.1()(64bit)
libblas.so.3()(64bit)
libboost_iostreams.so.1.69.0()(64bit)
libboost_regex.so.1.69.0()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libgcc_s.so.1()(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libgfortran.so.5()(64bit)
libgomp.so.1()(64bit)
libgomp.so.1(GOMP_1.0)(64bit)
libgomp.so.1(GOMP_4.0)(64bit)
libgomp.so.1(OMP_1.0)(64bit)
libgsl.so.23()(64bit)
libgslcblas.so.0()(64bit)
liblapack.so.3()(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libm.so.6(GLIBC_2.29)(64bit)
libstdc++.so.6()(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(CXXABI_1.3.8)(64bit)
libstdc++.so.6(CXXABI_1.3.9)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/26
/usr/lib/.build-id/26/af56fa27534c810aaab1dfb9168e4a6bcbd356
/usr/lib/.build-id/5b
/usr/lib/.build-id/5b/17293d6986ed4b13655d4fbc2782a8f1e5cc50
/usr/lib/.build-id/65
/usr/lib/.build-id/65/fcc9e9d94df31ccdec62cd276604b67d61ae0e
/usr/lib/.build-id/69
/usr/lib/.build-id/69/3337e9c84e9fcbc500478bf86f101b78657aec
/usr/lib/.build-id/7e
/usr/lib/.build-id/7e/5a76657fbcc6e0e7ec71c3cacc623e4905f37a
/usr/lib/.build-id/90
/usr/lib/.build-id/90/6daf2b477a80cc99d58e442ae5c4fac538da8b
/usr/lib/.build-id/95
/usr/lib/.build-id/95/50f01645ec7c5889d52543a7971929e5df7dcb
There is 10 files more in these RPM.

 
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