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mmseq rpm build for : Fedora 29. For other distributions click mmseq.

Name : mmseq
Version : 1.0.8a Vendor : Fedora Project
Release : 27.fc29 Date : 2018-08-27 12:29:28
Group : Applications/Engineering Source RPM : mmseq-1.0.8a-27.fc29.src.rpm
Size : 1.91 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora-secondary/releases/29/Everything/i386/os/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.8a-27.fc29.i686.rpm
     Search for other platforms
mmseq-1.0.8a-27.fc29.sparc.rpm
mmseq-1.0.8a-27.fc29.alpha.rpm
mmseq-1.0.8a-27.fc29.ppc.rpm
mmseq-1.0.8a-27.fc29.ia64.rpm
mmseq-1.0.8a-27.fc29.s390.rpm

Provides :
mmseq
mmseq(x86-32)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libarmadillo.so.9
libbam.so.1
libblas.so.3
libboost_iostreams.so.1.66.0
libboost_regex.so.1.66.0
libc.so.6
libc.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.1)
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.2)
libc.so.6(GLIBC_2.3)
libc.so.6(GLIBC_2.3.4)
libc.so.6(GLIBC_2.4)
libgcc_s.so.1
libgcc_s.so.1(GCC_3.0)
libgfortran.so.5
libgomp.so.1
libgomp.so.1(GOMP_1.0)
libgomp.so.1(GOMP_4.0)
libgomp.so.1(OMP_1.0)
libgsl.so.23
libgslcblas.so.0
liblapack.so.3
libm.so.6
libm.so.6(GLIBC_2.0)
libm.so.6(GLIBC_2.1)
libstdc++.so.6
libstdc++.so.6(CXXABI_1.3)
libstdc++.so.6(CXXABI_1.3.8)
libstdc++.so.6(CXXABI_1.3.9)
libstdc++.so.6(GLIBCXX_3.4)
libstdc++.so.6(GLIBCXX_3.4.11)
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.20)
libstdc++.so.6(GLIBCXX_3.4.21)
libstdc++.so.6(GLIBCXX_3.4.9)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/01
/usr/lib/.build-id/01/2ba4b160c497f6ef60be4acd83439c87f9a407
/usr/lib/.build-id/18
/usr/lib/.build-id/18/e9a58097687d103faa3166c3ab8a666cfc4d61
/usr/lib/.build-id/5e
/usr/lib/.build-id/5e/6102c591c1aeccf240dc81e2c00e95470286dd
/usr/lib/.build-id/71
/usr/lib/.build-id/71/8483ed32aacad954ba0f85506276b1e6093271
/usr/lib/.build-id/af
/usr/lib/.build-id/af/aefc06b01a77945a3648e3f73cef075c8f6771
/usr/lib/.build-id/c3
/usr/lib/.build-id/c3/bfb29e82dced62fa3f897259a2ee5be73d85dc
/usr/lib/.build-id/e0
/usr/lib/.build-id/e0/7342cafb1960de57370666a55e7489cb02f3b3
There is 10 files more in these RPM.

 
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