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mmseq rpm build for : Fedora 30. For other distributions click mmseq.

Name : mmseq
Version : 1.0.8a Vendor : Fedora Project
Release : 29.fc30 Date : 2019-02-02 00:01:27
Group : Unspecified Source RPM : mmseq-1.0.8a-29.fc30.src.rpm
Size : 2.45 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora-secondary/releases/30/Everything/i386/os/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.8a-29.fc30.i686.rpm
     Search for other platforms
mmseq-1.0.8a-29.fc30.sparc.rpm
mmseq-1.0.8a-29.fc30.alpha.rpm
mmseq-1.0.8a-29.fc30.ppc.rpm
mmseq-1.0.8a-29.fc30.ia64.rpm
mmseq-1.0.8a-29.fc30.s390.rpm

Provides :
mmseq
mmseq(x86-32)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libarmadillo.so.9
libbam.so.1
libblas.so.3
libboost_iostreams.so.1.69.0
libboost_regex.so.1.69.0
libc.so.6
libc.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.1)
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.2)
libc.so.6(GLIBC_2.3)
libc.so.6(GLIBC_2.3.4)
libc.so.6(GLIBC_2.4)
libgcc_s.so.1
libgcc_s.so.1(GCC_3.0)
libgfortran.so.5
libgomp.so.1
libgomp.so.1(GOMP_1.0)
libgomp.so.1(GOMP_4.0)
libgomp.so.1(OMP_1.0)
libgsl.so.23
libgslcblas.so.0
liblapack.so.3
libm.so.6
libm.so.6(GLIBC_2.0)
libm.so.6(GLIBC_2.1)
libm.so.6(GLIBC_2.29)
libstdc++.so.6
libstdc++.so.6(CXXABI_1.3)
libstdc++.so.6(CXXABI_1.3.8)
libstdc++.so.6(CXXABI_1.3.9)
libstdc++.so.6(GLIBCXX_3.4)
libstdc++.so.6(GLIBCXX_3.4.11)
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.20)
libstdc++.so.6(GLIBCXX_3.4.21)
libstdc++.so.6(GLIBCXX_3.4.26)
libstdc++.so.6(GLIBCXX_3.4.9)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/1f
/usr/lib/.build-id/1f/bf78b233358c74064b72194186a940c9b295c0
/usr/lib/.build-id/44
/usr/lib/.build-id/44/31750d07f4a08b60cb8f35631698f69fe0092c
/usr/lib/.build-id/52
/usr/lib/.build-id/52/d5bd524d389c04e15006ed70897f870b8036e3
/usr/lib/.build-id/80
/usr/lib/.build-id/80/b638494a400c16a1ddf2a5a109e2c459b8c672
/usr/lib/.build-id/8a
/usr/lib/.build-id/8a/1c663818d8011956aa232926f0ba57361db76a
/usr/lib/.build-id/8c
/usr/lib/.build-id/8c/6846563ddc3bfe9f89e328d76180a48bf2cf9c
/usr/lib/.build-id/e7
/usr/lib/.build-id/e7/4b272bb776bab3483a4b6035ce1dccc02d2a52
There is 10 files more in these RPM.

 
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