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bowtie rpm build for : RedHat EL 7. For other distributions click bowtie.

Name : bowtie
Version : 1.2.3 Vendor : Fedora Project
Release : 2.el7 Date : 2020-05-04 22:36:06
Group : Unspecified Source RPM : bowtie-1.2.3-2.el7.src.rpm
Size : 19.64 MB
Packager : Fedora Project
Summary : An ultrafast, memory-efficient short read aligner
Description :

Bowtie, an ultrafast, memory-efficient short read aligner for short
DNA sequences (reads) from next-gen sequencers. Please cite: Langmead
B, et al. Ultrafast and memory-efficient alignment of short DNA
sequences to the human genome. Genome Biol 10:R25.

RPM found in directory: /vol/rzm3/linux-fedora-buffet/epel/7/x86_64/Packages/b

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  bowtie-1.2.3-2.el7.x86_64.rpm
ftp.icm.edu.pl  bowtie-1.2.3-2.el7.x86_64.rpm
ftp.icm.edu.pl  bowtie-1.2.3-2.el7.x86_64.rpm
     

Provides :
bowtie
bowtie(x86-64)
bundled(seqan)
bundled(tiny-thread)

Requires :
/bin/bash
/bin/sh
/usr/bin/perl
/usr/bin/python3
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libgcc_s.so.1()(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libpthread.so.0()(64bit)
libpthread.so.0(GLIBC_2.2.5)(64bit)
libstdc++.so.6()(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
libtbb.so.2()(64bit)
libtbbmalloc_proxy.so.2()(64bit)
libz.so.1()(64bit)
libz.so.1(ZLIB_1.2.3.3)(64bit)
libz.so.1(ZLIB_1.2.3.5)(64bit)
perl(Getopt::Long)
perl(List::Util)
perl(strict)
perl(warnings)
python3
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/bin/bowtie
/usr/bin/bowtie-align-l
/usr/bin/bowtie-align-l-debug
/usr/bin/bowtie-align-s
/usr/bin/bowtie-align-s-debug
/usr/bin/bowtie-build
/usr/bin/bowtie-build-l
/usr/bin/bowtie-build-l-debug
/usr/bin/bowtie-build-s
/usr/bin/bowtie-build-s-debug
/usr/bin/bowtie-inspect
/usr/bin/bowtie-inspect-l
/usr/bin/bowtie-inspect-l-debug
/usr/bin/bowtie-inspect-s
/usr/bin/bowtie-inspect-s-debug
/usr/share/bowtie
/usr/share/bowtie/genomes
/usr/share/bowtie/genomes/NC_008253.fna
/usr/share/bowtie/indexes
/usr/share/bowtie/indexes/e_coli.1.ebwt
/usr/share/bowtie/indexes/e_coli.2.ebwt
/usr/share/bowtie/indexes/e_coli.3.ebwt
/usr/share/bowtie/indexes/e_coli.4.ebwt
/usr/share/bowtie/indexes/e_coli.README
/usr/share/bowtie/indexes/e_coli.rev.1.ebwt
/usr/share/bowtie/indexes/e_coli.rev.2.ebwt
/usr/share/bowtie/reads
/usr/share/bowtie/reads/e_coli_1000.fa
/usr/share/bowtie/reads/e_coli_1000.fq
/usr/share/bowtie/reads/e_coli_1000.raw
There is 54 files more in these RPM.

  
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