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mmseq rpm build for : Fedora 30. For other distributions click mmseq.

Name : mmseq
Version : 1.0.11 Vendor : Fedora Project
Release : 1.fc30 Date : 2019-11-29 22:58:08
Group : Unspecified Source RPM : mmseq-1.0.11-1.fc30.src.rpm
Size : 2.47 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora-secondary/updates/30/Everything/i386/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.11-1.fc30.i686.rpm
     Search for other platforms
mmseq-1.0.11-1.fc30.sparc.rpm
mmseq-1.0.11-1.fc30.alpha.rpm
mmseq-1.0.11-1.fc30.ppc.rpm
mmseq-1.0.11-1.fc30.ia64.rpm
mmseq-1.0.11-1.fc30.s390.rpm

Provides :
mmseq
mmseq(x86-32)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libblas.so.3
libboost_iostreams.so.1.69.0
libboost_regex.so.1.69.0
libc.so.6
libc.so.6(GLIBC_2.0)
libc.so.6(GLIBC_2.1)
libc.so.6(GLIBC_2.1.3)
libc.so.6(GLIBC_2.2)
libc.so.6(GLIBC_2.3)
libc.so.6(GLIBC_2.3.4)
libc.so.6(GLIBC_2.4)
libgcc_s.so.1
libgcc_s.so.1(GCC_3.0)
libgomp.so.1
libgomp.so.1(GOMP_1.0)
libgomp.so.1(GOMP_4.0)
libgomp.so.1(OMP_1.0)
libgsl.so.23
libgslcblas.so.0
libhts.so.2
liblapack.so.3
libm.so.6
libm.so.6(GLIBC_2.0)
libm.so.6(GLIBC_2.1)
libm.so.6(GLIBC_2.29)
libstdc++.so.6
libstdc++.so.6(CXXABI_1.3)
libstdc++.so.6(CXXABI_1.3.8)
libstdc++.so.6(CXXABI_1.3.9)
libstdc++.so.6(GLIBCXX_3.4)
libstdc++.so.6(GLIBCXX_3.4.11)
libstdc++.so.6(GLIBCXX_3.4.15)
libstdc++.so.6(GLIBCXX_3.4.20)
libstdc++.so.6(GLIBCXX_3.4.21)
libstdc++.so.6(GLIBCXX_3.4.26)
libstdc++.so.6(GLIBCXX_3.4.9)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/06
/usr/lib/.build-id/06/1b66cdf681966bfb194773dd11d01e6a5ebfef
/usr/lib/.build-id/66
/usr/lib/.build-id/66/2e9e0023e8666f489e3b16b3950d338a1d643c
/usr/lib/.build-id/83
/usr/lib/.build-id/83/d41a87a00c034e77efce2e29823edebe0b7310
/usr/lib/.build-id/87
/usr/lib/.build-id/87/b356f95bca0f99f8fbebd37ae88df779e40785
/usr/lib/.build-id/91
/usr/lib/.build-id/91/fec8a3d8b06742bcf5d7502c9ff033bba598d8
/usr/lib/.build-id/af
/usr/lib/.build-id/af/64bd584c7b117e466594048c7069ddf6d0e9c8
/usr/lib/.build-id/e5
/usr/lib/.build-id/e5/41e38b4a09046fc0d0b14daef7611357b348b8
There is 11 files more in these RPM.

 
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