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mmseq rpm build for : Fedora 30. For other distributions click mmseq.

Name : mmseq
Version : 1.0.11 Vendor : Fedora Project
Release : 1.fc30 Date : 2019-11-29 22:57:57
Group : Unspecified Source RPM : mmseq-1.0.11-1.fc30.src.rpm
Size : 2.44 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/updates/30/Everything/x86_64/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.11-1.fc30.x86_64.rpm
     

Provides :
mmseq
mmseq(x86-64)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libblas.so.3()(64bit)
libboost_iostreams.so.1.69.0()(64bit)
libboost_regex.so.1.69.0()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libgcc_s.so.1()(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libgomp.so.1()(64bit)
libgomp.so.1(GOMP_1.0)(64bit)
libgomp.so.1(GOMP_4.0)(64bit)
libgomp.so.1(OMP_1.0)(64bit)
libgsl.so.23()(64bit)
libgslcblas.so.0()(64bit)
libhts.so.2()(64bit)
liblapack.so.3()(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libm.so.6(GLIBC_2.29)(64bit)
libstdc++.so.6()(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(CXXABI_1.3.8)(64bit)
libstdc++.so.6(CXXABI_1.3.9)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/08
/usr/lib/.build-id/08/2ba2a16a954366a98a93a6a24b232204a0d663
/usr/lib/.build-id/0b
/usr/lib/.build-id/0b/8a2b27273e4188a456153ac8545104f198377a
/usr/lib/.build-id/72
/usr/lib/.build-id/72/8d9d1a0a43db8877ea46b2938b6f1cc0369684
/usr/lib/.build-id/8c
/usr/lib/.build-id/8c/6ef2bfe50ca7086a1236e5d1c79591f1b610f6
/usr/lib/.build-id/98
/usr/lib/.build-id/98/930a7e5b1ebcc884c54d4474ab6aa136041918
/usr/lib/.build-id/c2
/usr/lib/.build-id/c2/f241693695c46def34071b26dcccc2f0e7961c
/usr/lib/.build-id/d5
/usr/lib/.build-id/d5/9f84ea6151246e4d7b41bc16dcbf80fdf2d669
There is 11 files more in these RPM.

 
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