SEARCH
NEW RPMS
DIRECTORIES
ABOUT
FAQ
VARIOUS
BLOG

 
 

perl-BioPerl-Run rpm build for : Mageia Cauldron. For other distributions click perl-BioPerl-Run.

Name : perl-BioPerl-Run
Version : 1.7.3 Vendor : Mageia_Org
Release : 4.mga9 Date : 2022-03-29 00:27:54
Group : Development/Perl Source RPM : perl-BioPerl-Run-1.7.3-4.mga9.src.rpm
Size : 1.79 MB
Packager : umeabot < umeabot>
Summary : BioPerl wrappers for external programs
Description :
Officially organized in 1995 and existing informally for several years
prior, The Bioperl Project is an international association of developers
of open source Perl tools for bioinformatics, genomics and life science
research.

RPM found in directory: /vol/rzm3/linux-mageia/distrib/cauldron/aarch64/media/core/release

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  perl-BioPerl-Run-1.7.3-4.mga9.noarch.rpm
ftp.icm.edu.pl  perl-BioPerl-Run-1.7.3-4.mga9.noarch.rpm
ftp.icm.edu.pl  perl-BioPerl-Run-1.7.3-4.mga9.noarch.rpm
ftp.icm.edu.pl  perl-BioPerl-Run-1.7.3-4.mga9.noarch.rpm
     

Provides :
perl(Bio::DB::ESoap)
perl(Bio::DB::ESoap::WSDL)
perl(Bio::DB::SoapEUtilities)
perl(Bio::DB::SoapEUtilities::DocSumAdaptor)
perl(Bio::DB::SoapEUtilities::DocSumAdaptor::docsum)
perl(Bio::DB::SoapEUtilities::FetchAdaptor)
perl(Bio::DB::SoapEUtilities::FetchAdaptor::seq)
perl(Bio::DB::SoapEUtilities::FetchAdaptor::species)
perl(Bio::DB::SoapEUtilities::GQueryAdaptor)
perl(Bio::DB::SoapEUtilities::GQueryAdaptor::gquery)
perl(Bio::DB::SoapEUtilities::LinkAdaptor)
perl(Bio::DB::SoapEUtilities::LinkAdaptor::linkset)
perl(Bio::DB::SoapEUtilities::Result)
perl(Bio::Factory::EMBOSS)
perl(Bio::Tools::Run::Alignment::Amap)
perl(Bio::Tools::Run::Alignment::Blat)
perl(Bio::Tools::Run::Alignment::DBA)
perl(Bio::Tools::Run::Alignment::Exonerate)
perl(Bio::Tools::Run::Alignment::Gmap)
perl(Bio::Tools::Run::Alignment::Kalign)
perl(Bio::Tools::Run::Alignment::Lagan)
perl(Bio::Tools::Run::Alignment::MAFFT)
perl(Bio::Tools::Run::Alignment::MSAProbs)
perl(Bio::Tools::Run::Alignment::Muscle)
perl(Bio::Tools::Run::Alignment::Pal2Nal)
perl(Bio::Tools::Run::Alignment::Probalign)
perl(Bio::Tools::Run::Alignment::Probcons)
perl(Bio::Tools::Run::Alignment::Proda)
perl(Bio::Tools::Run::Alignment::Sim4)
perl(Bio::Tools::Run::Alignment::StandAloneFasta)
perl(Bio::Tools::Run::Analysis::Job::soap)
perl(Bio::Tools::Run::Analysis::soap)
perl(Bio::Tools::Run::AnalysisFactory::soap)
perl(Bio::Tools::Run::BEDTools)
perl(Bio::Tools::Run::BEDTools::Config)
perl(Bio::Tools::Run::BlastPlus)
perl(Bio::Tools::Run::BlastPlus::Config)
perl(Bio::Tools::Run::Coil)
perl(Bio::Tools::Run::EMBOSSApplication)
perl(Bio::Tools::Run::EMBOSSacd)
perl(Bio::Tools::Run::ERPIN)
perl(Bio::Tools::Run::Ensembl)
perl(Bio::Tools::Run::Eponine)
perl(Bio::Tools::Run::FootPrinter)
perl(Bio::Tools::Run::Genemark)
perl(Bio::Tools::Run::Genewise)
perl(Bio::Tools::Run::Genscan)
perl(Bio::Tools::Run::Glimmer)
perl(Bio::Tools::Run::Hmmer)
perl(Bio::Tools::Run::Infernal)
perl(Bio::Tools::Run::MCS)
perl(Bio::Tools::Run::Match)
perl(Bio::Tools::Run::Mdust)
perl(Bio::Tools::Run::Phylo::FastTree)
perl(Bio::Tools::Run::Phylo::Gerp)
perl(Bio::Tools::Run::Phylo::Hyphy::Base)
perl(Bio::Tools::Run::Phylo::Hyphy::BatchFile)
perl(Bio::Tools::Run::Phylo::Hyphy::FEL)
perl(Bio::Tools::Run::Phylo::Hyphy::Modeltest)
perl(Bio::Tools::Run::Phylo::Hyphy::REL)
perl(Bio::Tools::Run::Phylo::Hyphy::SLAC)
perl(Bio::Tools::Run::Phylo::LVB)
perl(Bio::Tools::Run::Phylo::Molphy::ProtML)
perl(Bio::Tools::Run::Phylo::Njtree::Best)
perl(Bio::Tools::Run::Phylo::Phast::PhastCons)
perl(Bio::Tools::Run::Phylo::Phast::PhyloFit)
perl(Bio::Tools::Run::Phylo::Phylip::Base)
perl(Bio::Tools::Run::Phylo::Phylip::Consense)
perl(Bio::Tools::Run::Phylo::Phylip::DrawGram)
perl(Bio::Tools::Run::Phylo::Phylip::DrawTree)
perl(Bio::Tools::Run::Phylo::Phylip::Neighbor)
perl(Bio::Tools::Run::Phylo::Phylip::PhylipConf)
perl(Bio::Tools::Run::Phylo::Phylip::ProtDist)
perl(Bio::Tools::Run::Phylo::Phylip::ProtPars)
perl(Bio::Tools::Run::Phylo::Phylip::SeqBoot)
perl(Bio::Tools::Run::Phylo::Phyml)
perl(Bio::Tools::Run::Phylo::QuickTree)
perl(Bio::Tools::Run::Phylo::Raxml)
perl(Bio::Tools::Run::Phylo::SLR)
perl(Bio::Tools::Run::Phylo::Semphy)
perl(Bio::Tools::Run::Primate)
perl(Bio::Tools::Run::Primer3)
perl(Bio::Tools::Run::Prints)
perl(Bio::Tools::Run::Profile)
perl(Bio::Tools::Run::Promoterwise)
perl(Bio::Tools::Run::Pseudowise)
perl(Bio::Tools::Run::RNAMotif)
perl(Bio::Tools::Run::RepeatMasker)
perl(Bio::Tools::Run::Samtools)
perl(Bio::Tools::Run::Samtools::Config)
perl(Bio::Tools::Run::Seg)
perl(Bio::Tools::Run::Signalp)
perl(Bio::Tools::Run::Simprot)
perl(Bio::Tools::Run::StandAloneBlast)
perl(Bio::Tools::Run::StandAloneBlastPlus)
perl(Bio::Tools::Run::StandAloneNCBIBlast)
perl(Bio::Tools::Run::StandAloneWUBlast)
perl(Bio::Tools::Run::Tmhmm)
perl(Bio::Tools::Run::TribeMCL)
perl(Bio::Tools::Run::Vista)
perl(Bio::Tools::Run::tRNAscanSE)
perl-BioPerl-Run
perl-Bioperl-Run
perl-bioperl-run

Requires :
perl >= 0:5.005_62
perl(Bio::AlignIO)
perl(Bio::Annotation::Collection)
perl(Bio::Annotation::Comment)
perl(Bio::Annotation::DBLink)
perl(Bio::Annotation::Reference)
perl(Bio::Annotation::SimpleValue)
perl(Bio::Cluster::SequenceFamily)
perl(Bio::DB::ESoap)
perl(Bio::DB::ESoap::WSDL)
perl(Bio::DB::EUtilities)
perl(Bio::DB::SoapEUtilities::DocSumAdaptor)
perl(Bio::DB::SoapEUtilities::FetchAdaptor)
perl(Bio::DB::SoapEUtilities::GQueryAdaptor)
perl(Bio::DB::SoapEUtilities::LinkAdaptor)
perl(Bio::DB::SoapEUtilities::Result)
perl(Bio::Factory::ApplicationFactoryI)
perl(Bio::Factory::FTLocationFactory)
perl(Bio::FeatureIO)
perl(Bio::Matrix::IO)
perl(Bio::Matrix::PhylipDist)
perl(Bio::ParameterBaseI)
perl(Bio::Root::IO)
perl(Bio::Root::Root)
perl(Bio::Search::HSP::GenericHSP)
perl(Bio::SearchIO)
perl(Bio::Seq)
perl(Bio::Seq::SeqBuilder)
perl(Bio::Seq::SeqFactory)
perl(Bio::SeqFeature::Collection)
perl(Bio::SeqFeature::FeaturePair)
perl(Bio::SeqFeature::Gene::Exon)
perl(Bio::SeqFeature::Gene::GeneStructure)
perl(Bio::SeqFeature::Gene::Transcript)
perl(Bio::SeqFeature::Generic)
perl(Bio::SeqIO)
perl(Bio::SimpleAlign)
perl(Bio::Species)
perl(Bio::Tools::AnalysisResult)
perl(Bio::Tools::Coil)
perl(Bio::Tools::Eponine)
perl(Bio::Tools::FootPrinter)
perl(Bio::Tools::Genemark)
perl(Bio::Tools::Genewise)
perl(Bio::Tools::Genscan)
perl(Bio::Tools::Glimmer)
perl(Bio::Tools::GuessSeqFormat)
perl(Bio::Tools::Match)
perl(Bio::Tools::Phylo::Gerp)
perl(Bio::Tools::Phylo::Molphy)
perl(Bio::Tools::Phylo::Phylip::ProtDist)
perl(Bio::Tools::Primer3)
perl(Bio::Tools::Prints)
perl(Bio::Tools::Profile)
perl(Bio::Tools::Promoterwise)
perl(Bio::Tools::Pseudowise)
perl(Bio::Tools::RepeatMasker)
perl(Bio::Tools::Run::Analysis)
perl(Bio::Tools::Run::AnalysisFactory)
perl(Bio::Tools::Run::BEDTools::Config)
perl(Bio::Tools::Run::BlastPlus)
perl(Bio::Tools::Run::BlastPlus::Config)
perl(Bio::Tools::Run::EMBOSSApplication)
perl(Bio::Tools::Run::EMBOSSacd)
perl(Bio::Tools::Run::Phylo::Hyphy::Base)
perl(Bio::Tools::Run::Phylo::Phast::PhyloFit)
perl(Bio::Tools::Run::Phylo::Phylip::Base)
perl(Bio::Tools::Run::Phylo::Phylip::PhylipConf)
perl(Bio::Tools::Run::Phylo::PhyloBase)
perl(Bio::Tools::Run::Samtools::Config)
perl(Bio::Tools::Run::StandAloneBlast)
perl(Bio::Tools::Run::WrapperBase)
perl(Bio::Tools::Seg)
perl(Bio::Tools::Signalp)
perl(Bio::Tools::Sim4::Results)
perl(Bio::Tools::Tmhmm)
perl(Bio::Tools::tRNAscanSE)
perl(Bio::TreeIO)
perl(Bio::WebAgent)
perl(Clone)
perl(Cwd)
perl(Data::Dumper)
perl(English)
perl(Exporter)
perl(File::Basename)
perl(File::Copy)
perl(File::Sort)
perl(File::Spec)
perl(File::Temp) >= 0.220.0
perl(IO::String)
perl(IPC::Run)
perl(SOAP::Lite)
perl(XML::Twig)
perl(base)
perl(lib)
perl(strict)
perl(vars)
perl(warnings)
perl-base >= 2:5.34.1
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1


Content of RPM :
/usr/bin/bp_multi_hmmsearch.pl
/usr/bin/bp_panalysis.pl
/usr/bin/bp_papplmaker.pl
/usr/bin/bp_run_neighbor.pl
/usr/bin/bp_run_protdist.pl
/usr/share/doc/perl-BioPerl-Run
/usr/share/doc/perl-BioPerl-Run/AUTHORS
/usr/share/doc/perl-BioPerl-Run/Changes
/usr/share/doc/perl-BioPerl-Run/DEPENDENCIES
/usr/share/doc/perl-BioPerl-Run/INSTALL
/usr/share/doc/perl-BioPerl-Run/LICENSE
/usr/share/doc/perl-BioPerl-Run/META.json
/usr/share/doc/perl-BioPerl-Run/META.yml
/usr/share/doc/perl-BioPerl-Run/MYMETA.yml
/usr/share/man/man1/bp_multi_hmmsearch.pl.1.xz
/usr/share/man/man1/bp_panalysis.pl.1.xz
/usr/share/man/man1/bp_papplmaker.pl.1.xz
/usr/share/man/man1/bp_run_neighbor.pl.1.xz
/usr/share/man/man1/bp_run_protdist.pl.1.xz
/usr/share/man/man3/Bio::DB::ESoap.3pm.xz
/usr/share/man/man3/Bio::DB::ESoap::WSDL.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities::DocSumAdaptor.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities::FetchAdaptor.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities::FetchAdaptor::seq.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities::FetchAdaptor::species.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities::GQueryAdaptor.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities::LinkAdaptor.3pm.xz
/usr/share/man/man3/Bio::DB::SoapEUtilities::Result.3pm.xz
/usr/share/man/man3/Bio::Factory::EMBOSS.3pm.xz
There is 205 files more in these RPM.

  
ICM