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mmseq rpm build for : Fedora 38. For other distributions click mmseq.

Name : mmseq
Version : 1.0.11 Vendor : Fedora Project
Release : 14.fc38 Date : 2023-01-19 23:54:48
Group : Unspecified Source RPM : mmseq-1.0.11-14.fc38.src.rpm
Size : 1.81 MB
Packager : Fedora Project
Summary : Haplotype and isoform specific expression estimation for RNA-seq
Description :
Software for fast, scalable haplotype and isoform expression
estimation using multi-mapping RNA-seq reads. Example scripts are included.

RPM found in directory: /packages/linux-pbone/archive.fedoraproject.org/fedora/linux/releases/38/Everything/x86_64/os/Packages/m

Content of RPM  Changelog  Provides Requires

Download
ftp.icm.edu.pl  mmseq-1.0.11-14.fc38.x86_64.rpm
     

Provides :
mmseq
mmseq(x86-64)

Requires :
/usr/bin/bash
/usr/bin/perl
/usr/bin/ruby
/usr/bin/sh
libboost_iostreams.so.1.78.0()(64bit)
libboost_regex.so.1.78.0()(64bit)
libc.so.6()(64bit)
libc.so.6(GLIBC_2.14)(64bit)
libc.so.6(GLIBC_2.2.5)(64bit)
libc.so.6(GLIBC_2.3)(64bit)
libc.so.6(GLIBC_2.3.4)(64bit)
libc.so.6(GLIBC_2.32)(64bit)
libc.so.6(GLIBC_2.33)(64bit)
libc.so.6(GLIBC_2.34)(64bit)
libc.so.6(GLIBC_2.4)(64bit)
libflexiblas.so.3()(64bit)
libgcc_s.so.1()(64bit)
libgcc_s.so.1(GCC_3.0)(64bit)
libgcc_s.so.1(GCC_3.3.1)(64bit)
libgomp.so.1()(64bit)
libgomp.so.1(GOMP_1.0)(64bit)
libgomp.so.1(GOMP_4.0)(64bit)
libgomp.so.1(OMP_1.0)(64bit)
libgsl.so.27()(64bit)
libgslcblas.so.0()(64bit)
libhts.so.3()(64bit)
libm.so.6()(64bit)
libm.so.6(GLIBC_2.2.5)(64bit)
libm.so.6(GLIBC_2.29)(64bit)
libstdc++.so.6()(64bit)
libstdc++.so.6(CXXABI_1.3)(64bit)
libstdc++.so.6(CXXABI_1.3.8)(64bit)
libstdc++.so.6(CXXABI_1.3.9)(64bit)
libstdc++.so.6(GLIBCXX_3.4)(64bit)
libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
libstdc++.so.6(GLIBCXX_3.4.26)(64bit)
libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
perl(strict)
perl-interpreter
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsZstd) <= 5.4.18-1
rtld(GNU_HASH)
ruby
samtools


Content of RPM :
/usr/bin/bam2hits
/usr/bin/ensembl_gtf_to_gff.pl
/usr/bin/extract_transcripts
/usr/bin/fastagrep.sh
/usr/bin/filterGTF.rb
/usr/bin/haploref.rb
/usr/bin/hitstools
/usr/bin/mmcollapse
/usr/bin/mmdiff
/usr/bin/mmseq
/usr/bin/mouse_strain_transcriptome.sh
/usr/bin/offsetGTF
/usr/bin/t2g_hits
/usr/bin/testregexp.rb
/usr/bin/usage.sh
/usr/lib/.build-id
/usr/lib/.build-id/16
/usr/lib/.build-id/16/0ea1a21b7eae20692e276738d8f43956e2bb21
/usr/lib/.build-id/24
/usr/lib/.build-id/24/fc9b8a3aac6f2a3405bf687e5e4f0982907828
/usr/lib/.build-id/2f
/usr/lib/.build-id/2f/000125a7420b52ca5f9220eb4b1bd2aff77b5a
/usr/lib/.build-id/57
/usr/lib/.build-id/57/1c2921a7a99bb7616f1174a8eaa742842f3124
/usr/lib/.build-id/87
/usr/lib/.build-id/87/a50e5c1a97289cd077f97e6e222c0e153b7e2a
/usr/lib/.build-id/8c
/usr/lib/.build-id/8c/978caee5d95bc254d1163b0cc8c09141c8eedd
/usr/lib/.build-id/cb
/usr/lib/.build-id/cb/a4b90ffcb7857950c31b7c313085c0001e72cb
There is 11 files more in these RPM.

 
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