| Name : R-MiRKAT
| |
| Version : 1.2.3
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp154.12.1
| Date : 2024-06-21 17:26:31
|
| Group : Development/Libraries/Other
| Source RPM : R-MiRKAT-1.2.3-lp154.12.1.src.rpm
|
| Size : 0.44 MB
| |
| Packager : https://www_suse_com/
| |
| Summary : Microbiome Regression-Based Kernel Association Tests
|
Description :
Test for overall association between microbiome composition data and
phenotypes via phylogenetic kernels. The phenotype can be univariate
continuous or binary (Zhao et al. (2015)
< doi:10.1016/j.ajhg.2015.04.003>), survival outcomes (Plantinga et al.
(2017) < doi:10.1186/s40168-017-0239-9>), multivariate (Zhan et al.
(2017) < doi:10.1002/gepi.22030>) and structured phenotypes (Zhan et al.
(2017) < doi:10.1111/biom.12684>). The package can also use robust
regression (unpublished work) and integrated quantile regression (Wang
et al. (2021) < doi:10.1093/bioinformatics/btab668>). In each case, the
microbiome community effect is modeled nonparametrically through a
kernel function, which can incorporate phylogenetic tree information.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/15.4/x86_64 |
