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R-dQTG.seq rpm build for : OpenSuSE. For other distributions click R-dQTG.seq.

Name : R-dQTG.seq
Version : 1.0.2 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp154.2.1 Date : 2024-06-08 06:48:14
Group : Development/Libraries/Other Source RPM : R-dQTG.seq-1.0.2-lp154.2.1.src.rpm
Size : 1.08 MB
Packager : https://www_suse_com/
Summary : A BSA Software for Detecting All Types of QTLs in BC, DH, RIL and F2
Description :
The new (dQTG.seq1 and dQTG.seq2) and existing (SmoothLOD, G\', deltaSNP
and ED) bulked segregant analysis methods are used to identify various
types of quantitative trait loci for complex traits via extreme
phenotype individuals in bi-parental segregation populations (F2,
backcross, doubled haploid and recombinant inbred line). The numbers of
marker alleles in extreme low and high pools are used in existing
methods to identify trait-related genes, while the numbers of marker
alleles and genotypes in extreme low and high pools are used in the new
methods to construct a new statistic Gw for identifying trait-related
genes. dQTG-seq2 is feasible to identify extremely over-dominant and
small-effect genes in F2. Li P, Li G, Zhang YW, Zuo JF, Liu JY, Zhang
YM (2022, < doi: 10.1016/j.xplc.2022.100319>).

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/15.4/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-dQTG.seq-1.0.2-lp154.2.1.x86_64.rpm
     

Provides :
R-dQTG.seq
R-dQTG.seq(x86-64)

Requires :
R-BB
R-R6
R-Rcpp
R-base
R-bit
R-bit64
R-cli
R-cpp11
R-crayon
R-data.table
R-doParallel
R-fansi
R-foreach
R-glue
R-hms
R-iterators
R-lifecycle
R-magrittr
R-openxlsx
R-pillar
R-pkgconfig
R-prettyunits
R-progress
R-qtl
R-quadprog
R-rlang
R-stringi
R-stringr
R-tibble
R-tidyselect
R-tzdb
R-utf8
R-vctrs
R-vroom
R-withr
R-writexl
R-zip
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/dQTG.seq
/usr/lib64/R/library/dQTG.seq/DESCRIPTION
/usr/lib64/R/library/dQTG.seq/INDEX
/usr/lib64/R/library/dQTG.seq/Instruction.pdf
/usr/lib64/R/library/dQTG.seq/Meta
/usr/lib64/R/library/dQTG.seq/Meta/Rd.rds
/usr/lib64/R/library/dQTG.seq/Meta/data.rds
/usr/lib64/R/library/dQTG.seq/Meta/features.rds
/usr/lib64/R/library/dQTG.seq/Meta/hsearch.rds
/usr/lib64/R/library/dQTG.seq/Meta/links.rds
/usr/lib64/R/library/dQTG.seq/Meta/nsInfo.rds
/usr/lib64/R/library/dQTG.seq/Meta/package.rds
/usr/lib64/R/library/dQTG.seq/NAMESPACE
/usr/lib64/R/library/dQTG.seq/R
/usr/lib64/R/library/dQTG.seq/R/dQTG.seq
/usr/lib64/R/library/dQTG.seq/R/dQTG.seq.rdb
/usr/lib64/R/library/dQTG.seq/R/dQTG.seq.rdx
/usr/lib64/R/library/dQTG.seq/data
/usr/lib64/R/library/dQTG.seq/data/Rdata.rdb
/usr/lib64/R/library/dQTG.seq/data/Rdata.rds
/usr/lib64/R/library/dQTG.seq/data/Rdata.rdx
/usr/lib64/R/library/dQTG.seq/extdata
/usr/lib64/R/library/dQTG.seq/extdata/BSA.csv
/usr/lib64/R/library/dQTG.seq/help
/usr/lib64/R/library/dQTG.seq/help/AnIndex
/usr/lib64/R/library/dQTG.seq/help/aliases.rds
/usr/lib64/R/library/dQTG.seq/help/dQTG.seq.rdb
/usr/lib64/R/library/dQTG.seq/help/dQTG.seq.rdx
/usr/lib64/R/library/dQTG.seq/help/paths.rds
/usr/lib64/R/library/dQTG.seq/html
There is 2 files more in these RPM.

 
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