| Name : R-mrMLM
| |
| Version : 5.0.1
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp155.2.4
| Date : 2024-09-10 16:00:51
|
| Group : Development/Libraries/Other
| Source RPM : R-mrMLM-5.0.1-lp155.2.4.src.rpm
|
| Size : 2.89 MB
| |
| Packager : https://www_suse_com/
| |
| Summary : Multi-Locus Random-SNP-Effect Mixed Linear Model Tools for GWAS
|
Description :
Conduct multi-locus genome-wide association study under the framework
of multi-locus random-SNP-effect mixed linear model (mrMLM). First,
each marker on the genome is scanned. Bonferroni correction is replaced
by a less stringent selection criterion for significant test. Then, all
the markers that are potentially associated with the trait are included
in a multi-locus genetic model, their effects are estimated by
empirical Bayes, and all the nonzero effects were further identified by
likelihood ratio test for significant QTL. The program may run on a
desktop or laptop computers. If marker genotypes in association mapping
population are almost homozygous, these methods in this software are
very effective. If there are many heterozygous marker genotypes, the
IIIVmrMLM software is recommended. Wen YJ, Zhang H, Ni YL, Huang B,
Zhang J, Feng JY, Wang SB, Dunwell JM, Zhang YM, Wu R (2018,
< doi:10.1093/bib/bbw145>), and Li M, Zhang YW, Zhang ZC, Xiang Y, Liu
MH, Zhou YH, Zuo JF, Zhang HQ, Chen Y, Zhang YM (2022,
< doi:10.1016/j.molp.2022.02.012>).
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/15.5/x86_64 |
