| Name : R-AmpliconDuo
| |
| Version : 1.1.1
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp156.14.1
| Date : 2024-06-24 15:02:19
|
| Group : Development/Libraries/Other
| Source RPM : R-AmpliconDuo-1.1.1-lp156.14.1.src.rpm
|
| Size : 0.54 MB
| |
| Packager : https://www_suse_com/
| |
| Summary : Statistical Analysis of Amplicon Data of the Same Sample to Identify Artefacts
|
Description :
Increasingly powerful techniques for high-throughput sequencing open
the possibility to comprehensively characterize microbial communities,
including rare species. However, a still unresolved issue are the
substantial error rates in the experimental process generating these
sequences. To overcome these limitations we propose an approach, where
each sample is split and the same amplification and sequencing protocol
is applied to both halves. This procedure should allow to detect likely
PCR and sequencing artifacts, and true rare species by comparison of
the results of both parts. The AmpliconDuo package, whereas amplicon
duo from here on refers to the two amplicon data sets of a split
sample, is intended to help interpret the obtained read frequency
distribution across split samples, and to filter the false positive
reads.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/15.6/x86_64 |
