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R-GxEprs rpm build for : OpenSuSE. For other distributions click R-GxEprs.

Name : R-GxEprs
Version : 1.2 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp156.2.1 Date : 2024-06-24 13:57:29
Group : Development/Libraries/Other Source RPM : R-GxEprs-1.2-lp156.2.1.src.rpm
Size : 1.31 MB
Packager : https://www_suse_com/
Summary : Genotype-by-Environment Interaction in Polygenic Score Models
Description :
A novel PRS model is introduced to enhance the prediction accuracy by
utilising GxE effects. This package performs Genome Wide Association
Studies (GWAS) and Genome Wide Environment Interaction Studies (GWEIS)
using a discovery dataset. The package has the ability to obtain
polygenic risk scores (PRSs) for a target sample. Finally it predicts
the risk values of each individual in the target sample. Users have the
choice of using existing models (Li et al., 2015)
< doi:10.1093/annonc/mdu565>, (Pandis et al., 2013)
< doi:10.1093/ejo/cjt054>, (Peyrot et al., 2018)
< doi:10.1016/j.biopsych.2017.09.009> and (Song et al., 2022)
< doi:10.1038/s41467-022-32407-9>, as well as newly proposed models for
genomic risk prediction (refer to the URL for more details).

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/15.6/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-GxEprs-1.2-lp156.2.1.x86_64.rpm
     

Provides :
R-GxEprs
R-GxEprs(x86-64)

Requires :
R-base
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/GxEprs
/usr/lib64/R/library/GxEprs/Bcov_discovery.txt
/usr/lib64/R/library/GxEprs/Bcov_target.txt
/usr/lib64/R/library/GxEprs/Bphe_discovery.txt
/usr/lib64/R/library/GxEprs/Bphe_target.txt
/usr/lib64/R/library/GxEprs/DESCRIPTION
/usr/lib64/R/library/GxEprs/DummyData.bed
/usr/lib64/R/library/GxEprs/DummyData.bim
/usr/lib64/R/library/GxEprs/DummyData.fam
/usr/lib64/R/library/GxEprs/INDEX
/usr/lib64/R/library/GxEprs/Meta
/usr/lib64/R/library/GxEprs/Meta/Rd.rds
/usr/lib64/R/library/GxEprs/Meta/data.rds
/usr/lib64/R/library/GxEprs/Meta/features.rds
/usr/lib64/R/library/GxEprs/Meta/hsearch.rds
/usr/lib64/R/library/GxEprs/Meta/links.rds
/usr/lib64/R/library/GxEprs/Meta/nsInfo.rds
/usr/lib64/R/library/GxEprs/Meta/package.rds
/usr/lib64/R/library/GxEprs/NAMESPACE
/usr/lib64/R/library/GxEprs/Qcov_discovery.txt
/usr/lib64/R/library/GxEprs/Qcov_target.txt
/usr/lib64/R/library/GxEprs/Qphe_discovery.txt
/usr/lib64/R/library/GxEprs/Qphe_target.txt
/usr/lib64/R/library/GxEprs/R
/usr/lib64/R/library/GxEprs/R/GxEprs
/usr/lib64/R/library/GxEprs/R/GxEprs.rdb
/usr/lib64/R/library/GxEprs/R/GxEprs.rdx
/usr/lib64/R/library/GxEprs/data
/usr/lib64/R/library/GxEprs/data/Rdata.rdb
/usr/lib64/R/library/GxEprs/data/Rdata.rds
There is 10 files more in these RPM.

 
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