| Name : R-DoubleExpSeq
| |
| Version : 1.1
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.2.13
| Date : 2024-06-14 11:15:04
|
| Group : Development/Libraries/Other
| Source RPM : R-DoubleExpSeq-1.1-lp153.2.13.src.rpm
|
| Size : 0.31 MB
| |
| Packager : (none)
| |
| Summary : Differential Exon Usage Test for RNA-Seq Data via Empirical Bayes Shrinkage of the Dispersion Parameter
|
Description :
Differential exon usage test for RNA-Seq data via an empirical Bayes
shrinkage method for the dispersion parameter the utilizes
inclusion-exclusion data to analyze the propensity to skip an exon
across groups. The input data consists of two matrices where each row
represents an exon and the columns represent the biological samples.
The first matrix is the count of the number of reads expressing the
exon for each sample. The second matrix is the count of the number of
reads that either express the exon or explicitly skip the exon across
the samples, a.k.a. the total count matrix. Dividing the two matrices
yields proportions representing the propensity to express the exon
versus skipping the exon for each sample.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
