| Name : R-IPCAPS
| |
| Version : 1.1.8
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.2.7
| Date : 2024-06-14 11:50:53
|
| Group : Development/Libraries/Other
| Source RPM : R-IPCAPS-1.1.8-lp153.2.7.src.rpm
|
| Size : 0.53 MB
| |
| Packager : (none)
| |
| Summary : Iterative Pruning to Capture Population Structure
|
Description :
An unsupervised clustering algorithm based on iterative pruning is for
capturing population structure. This version supports ordinal data
which can be applied directly to SNP data to identify fine-level
population structure and it is built on the iterative pruning Principal
Component Analysis (\'ipPCA\') algorithm as explained in Intarapanich et
al. (2009) < doi:10.1186/1471-2105-10-382>. The \'IPCAPS\' involves an
iterative process using multiple splits based on multivariate Gaussian
mixture modeling of principal components and \'Expectation-Maximization\'
clustering as explained in Lebret et al. (2015)
< doi:10.18637/jss.v067.i06>. In each iteration, rough clusters and
outliers are also identified using the function rubikclust() from the R
package \'KRIS\'.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
