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R-MatrixEQTL rpm build for : openSUSE Leap 15. For other distributions click R-MatrixEQTL.

Name : R-MatrixEQTL
Version : 2.3 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp153.2.13 Date : 2024-06-14 10:58:24
Group : Development/Libraries/Other Source RPM : R-MatrixEQTL-2.3-lp153.2.13.src.rpm
Size : 0.40 MB
Packager : (none)
Summary : Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
Description :
Matrix eQTL is designed for fast eQTL analysis on large datasets.
Matrix eQTL can test for association between genotype and gene
expression using linear regression with either additive or ANOVA
genotype effects. The models can include covariates to account for
factors as population stratification, gender, and clinical variables.
It also supports models with heteroscedastic and/or correlated errors,
false discovery rate estimation and separate treatment of local (cis)
and distant (trans) eQTLs. For more details see Shabalin (2012)
< doi:10.1093/bioinformatics/bts163>.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-MatrixEQTL-2.3-lp153.2.13.x86_64.rpm
     

Provides :
R-MatrixEQTL
R-MatrixEQTL(x86-64)

Requires :
R-base
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/MatrixEQTL
/usr/lib64/R/library/MatrixEQTL/CITATION
/usr/lib64/R/library/MatrixEQTL/DESCRIPTION
/usr/lib64/R/library/MatrixEQTL/INDEX
/usr/lib64/R/library/MatrixEQTL/Meta
/usr/lib64/R/library/MatrixEQTL/Meta/Rd.rds
/usr/lib64/R/library/MatrixEQTL/Meta/data.rds
/usr/lib64/R/library/MatrixEQTL/Meta/demo.rds
/usr/lib64/R/library/MatrixEQTL/Meta/features.rds
/usr/lib64/R/library/MatrixEQTL/Meta/hsearch.rds
/usr/lib64/R/library/MatrixEQTL/Meta/links.rds
/usr/lib64/R/library/MatrixEQTL/Meta/nsInfo.rds
/usr/lib64/R/library/MatrixEQTL/Meta/package.rds
/usr/lib64/R/library/MatrixEQTL/NAMESPACE
/usr/lib64/R/library/MatrixEQTL/R
/usr/lib64/R/library/MatrixEQTL/R/MatrixEQTL
/usr/lib64/R/library/MatrixEQTL/R/MatrixEQTL.rdb
/usr/lib64/R/library/MatrixEQTL/R/MatrixEQTL.rdx
/usr/lib64/R/library/MatrixEQTL/data
/usr/lib64/R/library/MatrixEQTL/data/Covariates.txt
/usr/lib64/R/library/MatrixEQTL/data/GE.txt
/usr/lib64/R/library/MatrixEQTL/data/SNP.txt
/usr/lib64/R/library/MatrixEQTL/data/geneloc.txt
/usr/lib64/R/library/MatrixEQTL/data/snpsloc.txt
/usr/lib64/R/library/MatrixEQTL/demo
/usr/lib64/R/library/MatrixEQTL/demo/a.nocvrt.r
/usr/lib64/R/library/MatrixEQTL/demo/b.cvrt.r
/usr/lib64/R/library/MatrixEQTL/demo/c.weights.r
/usr/lib64/R/library/MatrixEQTL/demo/d.ANOVA.r
/usr/lib64/R/library/MatrixEQTL/demo/e.ANOVA5.r
There is 17 files more in these RPM.

 
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