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R-MiRNAQCD rpm build for : openSUSE Leap 15. For other distributions click R-MiRNAQCD.

Name : R-MiRNAQCD
Version : 1.1.2 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp153.7.7 Date : 2024-06-14 11:51:00
Group : Development/Libraries/Other Source RPM : R-MiRNAQCD-1.1.2-lp153.7.7.src.rpm
Size : 0.74 MB
Packager : (none)
Summary : Micro-RNA Quality Control and Diagnosis
Description :
A complete and dedicated analytical toolbox for quality control and
diagnosis based on subject-related measurements of micro-RNA (miRNA)
expressions. The package consists of a set of functions that allow to
train, optimize and use a Bayesian classifier that relies on multiplets
of measured miRNA expressions. The package also implements the quality
control tools required to preprocess input datasets. In addition, the
package provides a function to carry out a statistical analysis of
miRNA expressions, which can give insights to improve the classifier\'s
performance. The method implemented in the package was first introduced
in L. Ricci, V. Del Vescovo, C. Cantaloni, M. Grasso, M. Barbareschi
and M. A. Denti, \"Statistical analysis of a Bayesian classifier based
on the expression of miRNAs\", BMC Bioinformatics 16:287, 2015
< doi:10.1186/s12859-015-0715-9>. The package is thoroughly described in
M. Castelluzzo, A. Perinelli, S. Detassis, M. A. Denti and L. Ricci,
\"MiRNA-QC-and-Diagnosis: An R package for diagnosis based on MiRNA
expression\", SoftwareX 12:100569, 2020
< doi:10.1016/j.softx.2020.100569>. Please cite both these works if you
use the package for your analysis. DISCLAIMER: The software in this
package is for general research purposes only and is thus provided
WITHOUT ANY WARRANTY. It is NOT intended to form the basis of clinical
decisions. Please refer to the GNU General Public License 3.0 (GPLv3)
for further information.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-MiRNAQCD-1.1.2-lp153.7.7.x86_64.rpm
     

Provides :
R-MiRNAQCD
R-MiRNAQCD(x86-64)

Requires :
R-R6
R-RColorBrewer
R-Rcpp
R-base
R-cli
R-colorspace
R-fansi
R-farver
R-ggplot2
R-glue
R-gtable
R-isoband
R-labeling
R-lifecycle
R-magrittr
R-munsell
R-pROC
R-pillar
R-pkgconfig
R-plyr
R-rlang
R-scales
R-tibble
R-utf8
R-vctrs
R-viridisLite
R-withr
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/MiRNAQCD
/usr/lib64/R/library/MiRNAQCD/CITATION
/usr/lib64/R/library/MiRNAQCD/DESCRIPTION
/usr/lib64/R/library/MiRNAQCD/INDEX
/usr/lib64/R/library/MiRNAQCD/Meta
/usr/lib64/R/library/MiRNAQCD/Meta/Rd.rds
/usr/lib64/R/library/MiRNAQCD/Meta/features.rds
/usr/lib64/R/library/MiRNAQCD/Meta/hsearch.rds
/usr/lib64/R/library/MiRNAQCD/Meta/links.rds
/usr/lib64/R/library/MiRNAQCD/Meta/nsInfo.rds
/usr/lib64/R/library/MiRNAQCD/Meta/package.rds
/usr/lib64/R/library/MiRNAQCD/NAMESPACE
/usr/lib64/R/library/MiRNAQCD/R
/usr/lib64/R/library/MiRNAQCD/R/MiRNAQCD
/usr/lib64/R/library/MiRNAQCD/R/MiRNAQCD.rdb
/usr/lib64/R/library/MiRNAQCD/R/MiRNAQCD.rdx
/usr/lib64/R/library/MiRNAQCD/doc
/usr/lib64/R/library/MiRNAQCD/doc/manual.pdf
/usr/lib64/R/library/MiRNAQCD/extdata
/usr/lib64/R/library/MiRNAQCD/extdata/README
/usr/lib64/R/library/MiRNAQCD/extdata/example_real_dataset_1.R
/usr/lib64/R/library/MiRNAQCD/extdata/example_real_dataset_2.R
/usr/lib64/R/library/MiRNAQCD/extdata/example_synthetic_dataset.R
/usr/lib64/R/library/MiRNAQCD/extdata/real_dataset_1_additional.dat
/usr/lib64/R/library/MiRNAQCD/extdata/real_dataset_1_testing.dat
/usr/lib64/R/library/MiRNAQCD/extdata/real_dataset_1_training.dat
/usr/lib64/R/library/MiRNAQCD/extdata/real_dataset_2_testing.dat
/usr/lib64/R/library/MiRNAQCD/extdata/real_dataset_2_training.dat
/usr/lib64/R/library/MiRNAQCD/extdata/synthetic_dataset_alpha.dat
/usr/lib64/R/library/MiRNAQCD/extdata/synthetic_dataset_beta.dat
There is 15 files more in these RPM.

 
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