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R-OmicsQC rpm build for : openSUSE Leap 15. For other distributions click R-OmicsQC.

Name : R-OmicsQC
Version : 1.1.0 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp153.3.1 Date : 2024-07-13 15:12:38
Group : Development/Libraries/Other Source RPM : R-OmicsQC-1.1.0-lp153.3.1.src.rpm
Size : 1.84 MB
Packager : (none)
Summary : Nominating Quality Control Outliers in Genomic Profiling Studies
Description :
A method that analyzes quality control metrics from multi-sample
genomic sequencing studies and nominates poor quality samples for
exclusion. Per sample quality control data are transformed into
z-scores and aggregated. The distribution of aggregated z-scores are
modelled using parametric distributions. The parameters of the optimal
model, selected either by goodness-of-fit statistics or
user-designation, are used for outlier nomination. Two implementations
of the Cosine Similarity Outlier Detection algorithm are provided with
flexible parameters for dataset customization.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-OmicsQC-1.1.0-lp153.3.1.x86_64.rpm
     

Provides :
R-OmicsQC
R-OmicsQC(x86-64)

Requires :
R-BoutrosLab.plotting.general
R-RColorBrewer
R-Rcpp
R-RcppEigen
R-SnowballC
R-base
R-cli
R-deldir
R-e1071
R-fitdistrplus
R-glue
R-gridExtra
R-gtable
R-hexbin
R-interp
R-jpeg
R-latticeExtra
R-lifecycle
R-lsa
R-png
R-proxy
R-rlang
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/OmicsQC
/usr/lib64/R/library/OmicsQC/DESCRIPTION
/usr/lib64/R/library/OmicsQC/INDEX
/usr/lib64/R/library/OmicsQC/Meta
/usr/lib64/R/library/OmicsQC/Meta/Rd.rds
/usr/lib64/R/library/OmicsQC/Meta/data.rds
/usr/lib64/R/library/OmicsQC/Meta/features.rds
/usr/lib64/R/library/OmicsQC/Meta/hsearch.rds
/usr/lib64/R/library/OmicsQC/Meta/links.rds
/usr/lib64/R/library/OmicsQC/Meta/nsInfo.rds
/usr/lib64/R/library/OmicsQC/Meta/package.rds
/usr/lib64/R/library/OmicsQC/Meta/vignette.rds
/usr/lib64/R/library/OmicsQC/NAMESPACE
/usr/lib64/R/library/OmicsQC/NEWS.md
/usr/lib64/R/library/OmicsQC/R
/usr/lib64/R/library/OmicsQC/R/OmicsQC
/usr/lib64/R/library/OmicsQC/R/OmicsQC.rdb
/usr/lib64/R/library/OmicsQC/R/OmicsQC.rdx
/usr/lib64/R/library/OmicsQC/data
/usr/lib64/R/library/OmicsQC/data/Rdata.rdb
/usr/lib64/R/library/OmicsQC/data/Rdata.rds
/usr/lib64/R/library/OmicsQC/data/Rdata.rdx
/usr/lib64/R/library/OmicsQC/doc
/usr/lib64/R/library/OmicsQC/doc/Intro_to_omicsQC.R
/usr/lib64/R/library/OmicsQC/doc/Intro_to_omicsQC.Rmd
/usr/lib64/R/library/OmicsQC/doc/Intro_to_omicsQC.html
/usr/lib64/R/library/OmicsQC/doc/index.html
/usr/lib64/R/library/OmicsQC/help
/usr/lib64/R/library/OmicsQC/help/AnIndex
/usr/lib64/R/library/OmicsQC/help/OmicsQC.rdb
There is 6 files more in these RPM.

 
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