| Name : R-PopGenKit
| |
| Version : 1.0
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.2.13
| Date : 2024-06-14 11:03:29
|
| Group : Development/Libraries/Other
| Source RPM : R-PopGenKit-1.0-lp153.2.13.src.rpm
|
| Size : 0.19 MB
| |
| Packager : (none)
| |
| Summary : Useful functions for (batch) file conversion and data resampling in microsatellite datasets
|
Description :
There are two main purposes to this package. The first is to allow
batch conversion of Genepop (Rousset 2008) input files for use with
Arlequin (Excoffier and Lischer 2010), which has a simple GUI to
analyze batch files. Two commonly used simulation software, BottleSim
(Kuo & Janzen 2003) and Easypop (Balloux 2001) produce Genepop output
files that can be analyzed this way. There are also functions to
convert to and from BottleSim format, to quickly produce allele
frequency tables or to convert a file directly for use in ordination
analyses (e.g. principal component analysis). This package also
includes functions to calculate allele rarefaction curves, confidence
intervals on heterozygosity and allelic richness with resampling
strategies (bootstrap and jackknife).
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
