| Name : R-bioPN
| |
| Version : 1.2.0
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.2.13
| Date : 2024-06-14 11:05:42
|
| Group : Development/Libraries/Other
| Source RPM : R-bioPN-1.2.0-lp153.2.13.src.rpm
|
| Size : 0.10 MB
| |
| Packager : (none)
| |
| Summary : Simulation of deterministic and stochastic biochemical reaction networks using Petri Nets
|
Description :
bioPN is a package suited to perform simulation of deterministic and
stochastic systems of biochemical reaction networks. Models are defined
using a subset of Petri Nets, in a way that is close at how chemical
reactions are defined. For deterministic solutions, bioPN creates the
associated system of differential equations \"on the fly\", and solves it
with a Runge Kutta Dormand Prince 45 explicit algorithm. For stochastic
solutions, bioPN offers variants of Gillespie algorithm, or SSA. For
hybrid deterministic/stochastic, it employs the Haseltine and Rawlings
algorithm, that partitions the system in fast and slow reactions. bioPN
algorithms are developed in C to achieve adequate performance.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
