| Name : R-chromatographR
| |
| Version : 0.4.4
| Vendor : obs://build_opensuse_org/devel:languages:R
|
| Release : lp153.2.8
| Date : 2024-06-14 12:06:32
|
| Group : Development/Libraries/Other
| Source RPM : R-chromatographR-0.4.4-lp153.2.8.src.rpm
|
| Size : 2.73 MB
| |
| Packager : (none)
| |
| Summary : Chromatographic Data Analysis Toolset
|
Description :
Tools for high-throughput analysis of HPLC-DAD/UV chromatograms (or
similar data). Includes functions for preprocessing, alignment,
peak-finding and fitting, peak-table construction, data-visualization,
etc. Preprocessing and peak-table construction follow the rough formula
laid out in alsace (Wehrens, R., Bloemberg, T.G., and Eilers P.H.C.,
2015. < doi:10.1093/bioinformatics/btv299>. Alignment of chromatograms
is available using parametric time warping (ptw) (Wehrens, R.,
Bloemberg, T.G., and Eilers P.H.C. 2015.
< doi:10.1093/bioinformatics/btv299>) or variable penalty dynamic time
warping (VPdtw) (Clifford, D., & Stone, G. 2012.
< doi:10.18637/jss.v047.i08>). Peak-finding uses the algorithm by Tom
O\'Haver
< http://terpconnect.umd.edu/~toh/spectrum/PeakFindingandMeasurement.htm>.
Peaks are then fitted to a gaussian or exponential-gaussian hybrid peak
shape using non-linear least squares (Lan, K. & Jorgenson, J. W. 2001.
< doi:10.1016/S0021-9673(01)00594-5>). See the vignette for more details
and suggested workflow.
|
RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64 |
