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R-epiGWAS rpm build for : openSUSE Leap 15. For other distributions click R-epiGWAS.

Name : R-epiGWAS
Version : 1.0.2 Vendor : obs://build_opensuse_org/devel:languages:R
Release : lp153.7.11 Date : 2024-06-14 12:07:18
Group : Development/Libraries/Other Source RPM : R-epiGWAS-1.0.2-lp153.7.11.src.rpm
Size : 0.21 MB
Packager : (none)
Summary : Robust Methods for Epistasis Detection
Description :
Functions to perform robust epistasis detection in genome-wide
association studies, as described in Slim et al. (2018)
< doi:10.1101/442749>. The implemented methods identify pairwise
interactions between a particular target variant and the rest of the
genotype, using a propensity score approach. The propensity score
models the linkage disequilibrium between the target and the rest of
the genotype. All methods are penalized regression approaches, which
differently incorporate the propensity score to only recover the
synergistic effects between the target and the genotype.

RPM found in directory: /packages/linux-pbone/ftp5.gwdg.de/pub/opensuse/repositories/devel:/languages:/R:/autoCRAN/openSUSE_Leap_15.3/x86_64

Content of RPM  Provides Requires

Download
ftp.icm.edu.pl  R-epiGWAS-1.0.2-lp153.7.11.x86_64.rpm
     

Provides :
R-epiGWAS
R-epiGWAS(x86-64)

Requires :
R-BH
R-DescTools
R-Exact
R-Rcpp
R-RcppArmadillo
R-RcppEigen
R-RcppProgress
R-Rdpack
R-SNPknock
R-base
R-data.table
R-e1071
R-expm
R-foreach
R-gld
R-glmnet
R-iterators
R-lmom
R-matrixStats
R-mvtnorm
R-proxy
R-rbibutils
R-rootSolve
R-rstudioapi
R-shape
rpmlib(CompressedFileNames) <= 3.0.4-1
rpmlib(FileDigests) <= 4.6.0-1
rpmlib(PayloadFilesHavePrefix) <= 4.0-1
rpmlib(PayloadIsXz) <= 5.2-1


Content of RPM :
/usr/lib64/R/library/epiGWAS
/usr/lib64/R/library/epiGWAS/DESCRIPTION
/usr/lib64/R/library/epiGWAS/INDEX
/usr/lib64/R/library/epiGWAS/Meta
/usr/lib64/R/library/epiGWAS/Meta/Rd.rds
/usr/lib64/R/library/epiGWAS/Meta/data.rds
/usr/lib64/R/library/epiGWAS/Meta/features.rds
/usr/lib64/R/library/epiGWAS/Meta/hsearch.rds
/usr/lib64/R/library/epiGWAS/Meta/links.rds
/usr/lib64/R/library/epiGWAS/Meta/nsInfo.rds
/usr/lib64/R/library/epiGWAS/Meta/package.rds
/usr/lib64/R/library/epiGWAS/Meta/vignette.rds
/usr/lib64/R/library/epiGWAS/NAMESPACE
/usr/lib64/R/library/epiGWAS/NEWS.md
/usr/lib64/R/library/epiGWAS/R
/usr/lib64/R/library/epiGWAS/R/epiGWAS
/usr/lib64/R/library/epiGWAS/R/epiGWAS.rdb
/usr/lib64/R/library/epiGWAS/R/epiGWAS.rdx
/usr/lib64/R/library/epiGWAS/data
/usr/lib64/R/library/epiGWAS/data/Rdata.rdb
/usr/lib64/R/library/epiGWAS/data/Rdata.rds
/usr/lib64/R/library/epiGWAS/data/Rdata.rdx
/usr/lib64/R/library/epiGWAS/doc
/usr/lib64/R/library/epiGWAS/doc/epistasis.R
/usr/lib64/R/library/epiGWAS/doc/epistasis.Rmd
/usr/lib64/R/library/epiGWAS/doc/epistasis.html
/usr/lib64/R/library/epiGWAS/doc/index.html
/usr/lib64/R/library/epiGWAS/help
/usr/lib64/R/library/epiGWAS/help/AnIndex
/usr/lib64/R/library/epiGWAS/help/aliases.rds
There is 6 files more in these RPM.

 
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